RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 FKBP10Q96AY3 582 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 C1orf43Q9BWL3 253 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 SEMA4CQ9C0C4 833 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 TINAGL1Q9GZM7 467 aaPredicted RBP2.26□□□□□ -2.05
CD44-212ENST00000524922 CCDC8Q9H0W5 538 aaPredicted RBP2.26□□□□□ -2.05
CD44-212ENST00000524922 SLKQ9H2G2 1235 aaPredicted RBP2.26□□□□□ -2.05
CD44-212ENST00000524922 MKS1Q9NXB0 559 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 EHD3Q9NZN3 535 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 TRHDEQ9UKU6 1024 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 PADI4Q9UM07 663 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 ATP8A1Q9Y2Q0 1164 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 TMA7Q9Y2S6 64 aaKnown RBP2.26□□□□□ -2.05
CD44-212ENST00000524922 THRAP3Q9Y2W1 955 aaKnown RBP2.26□□□□□ -2.05
CD44-212ENST00000524922 PRKAB1Q9Y478 270 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.26□□□□□ -2.05
CD44-212ENST00000524922 CFAP20Q9Y6A4 193 aaKnown RBP2.26□□□□□ -2.05
CD44-212ENST00000524922 NRXN3Q9Y4C0 1643 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 TNS1Q9HBL0 1735 aaKnown RBP2.25□□□□□ -2.05
CD44-212ENST00000524922 CAMTA1Q9Y6Y1 1673 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 TNKSO95271 1327 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 KLHL33A6NCF5 533 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 ZNF785A8K8V0 405 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 H0YIZ8 118 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 DCLK1O15075 740 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 ERC2O15083 957 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 KIF20AO95235 890 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 CHEK2O96017 543 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 IL6RP08887 468 aaPredicted RBP2.25□□□□□ -2.05
CD44-212ENST00000524922 KELP23276 732 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 EPHB2P29323 1055 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 CYP2C19P33261 490 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 LIPAP38571 399 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 ZNF134P52741 427 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 ZNF135P52742 658 aaPredicted RBP2.25□□□□□ -2.05
CD44-212ENST00000524922 ADKP55263 362 aaKnown RBP2.25□□□□□ -2.05
CD44-212ENST00000524922 KRTAP10-6P60371 365 aaPredicted RBP2.25□□□□□ -2.05
CD44-212ENST00000524922 KIF23Q02241 960 aaPredicted RBP2.25□□□□□ -2.05
CD44-212ENST00000524922 BMPR2Q13873 1038 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 ETFDHQ16134 617 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 CEP78Q5JTW2 689 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 MORN5Q5VZ52 161 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 SLC30A10Q6XR72 485 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 NPM2Q86SE8 214 aaKnown RBP2.25□□□□□ -2.05
CD44-212ENST00000524922 DTX2Q86UW9 622 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 AMOTL1Q8IY63 956 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 ATL2Q8NHH9 583 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 KLHDC4Q8TBB5 520 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 ZBTB9Q96C00 473 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 SMOQ99835 787 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 QTRT1Q9BXR0 403 aaKnown RBP2.25□□□□□ -2.05
CD44-212ENST00000524922 ACTRT3Q9BYD9 372 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 SLC13A1Q9BZW2 595 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 MRPL46Q9H2W6 279 aaKnown RBP2.25□□□□□ -2.05
CD44-212ENST00000524922 DLL3Q9NYJ7 618 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 SAP30BPQ9UHR5 308 aaKnown RBP2.25□□□□□ -2.05
CD44-212ENST00000524922 SSX2IPQ9Y2D8 614 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 ABCC6O95255 1503 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 PCNTO95613 3336 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 GCC2Q8IWJ2 1684 aa2.25□□□□□ -2.05
CD44-212ENST00000524922 CPDO75976 1380 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 TRPM1Q7Z4N2 1603 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 ABCC11Q96J66 1382 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 SPATA31A5Q5VU36 1347 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 SPATA31A7Q8IWB4 1347 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 CASZ1Q86V15 1759 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 F5H697 171 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 TRIM38O00635 465 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 PPM1DO15297 605 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 TRIAP1O43715 76 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 ORC4O43929 436 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 DNAJB5O75953 348 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 NTN1O95631 604 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 TTLL1O95922 423 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 FTH1P19P0C7X4 201 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 EBLN1P0CF75 366 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 RARBP10826 455 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 CHRM3P20309 590 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 CTGFP29279 349 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 PIK3CGP48736 1102 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 HK3P52790 923 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 SLC16A1P53985 500 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 KRTAP10-7P60409 375 aaPredicted RBP2.24□□□□□ -2.05
CD44-212ENST00000524922 PSMC1P62191 440 aaKnown RBP2.24□□□□□ -2.05
CD44-212ENST00000524922 GRM1Q13255 1194 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 DAZAP2Q15038 168 aaPredicted RBP2.24□□□□□ -2.05
CD44-212ENST00000524922 TBCCQ15814 346 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 CLUL1Q15846 466 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 SRSF7Q16629 238 aaKnown RBP eCLIP2.24□□□□□ -2.05
CD44-212ENST00000524922 PREPLQ4J6C6 727 aaPredicted RBP2.24□□□□□ -2.05
CD44-212ENST00000524922 TMEM119Q4V9L6 283 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 GADL1Q6ZQY3 521 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 ZNF551Q7Z340 670 aaPredicted RBP2.24□□□□□ -2.05
CD44-212ENST00000524922 YTHDF3Q7Z739 585 aaKnown RBP2.24□□□□□ -2.05
CD44-212ENST00000524922 DEFB132Q7Z7B7 95 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 TTC7BQ86TV6 843 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 PPP1R3BQ86XI6 285 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.24□□□□□ -2.05
CD44-212ENST00000524922 IGFBPL1Q8WX77 278 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 TBC1D5Q92609 795 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 FAM136AQ96C01 138 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms