RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 CALN1Q9BXU9 219 aa13.77□□□□□ -0.2
CAPN1-202ENST00000524773 XPNPEP1Q9NQW7 623 aa13.77□□□□□ -0.2
CAPN1-202ENST00000524773 FARP1Q9Y4F1 1045 aaPredicted RBP13.77□□□□□ -0.2
CAPN1-202ENST00000524773 RGPD3A6NKT7 1758 aaPredicted RBP13.77□□□□□ -0.2
CAPN1-202ENST00000524773 RGPD4Q7Z3J3 1758 aa13.77□□□□□ -0.2
CAPN1-202ENST00000524773 PRR5-ARHGAP8B1AHC4 643 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 RNASEH1O60930 286 aaKnown RBP13.77□□□□□ -0.21
CAPN1-202ENST00000524773 PDE5AO76074 875 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 LYNP07948 512 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 TNFSF9P41273 254 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 RPS6KA3P51812 740 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 RTP1P59025 263 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 ARHGAP8P85298 464 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 SLC25A3Q00325 362 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 AP1B1Q10567 949 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 PRKD1Q15139 912 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-202ENST00000524773 CCDC142Q17RM4 750 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 SH3PXD2AQ5TCZ1 1133 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 GPAT2Q6NUI2 795 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 FAM43BQ6ZT52 329 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-202ENST00000524773 CDR2LQ86X02 465 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-202ENST00000524773 TMC2Q8TDI7 906 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 SYTL5Q8TDW5 730 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-202ENST00000524773 TFAP2BQ92481 460 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 GATA6Q92908 595 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 FBXL18Q96ME1 805 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 RILPQ96NA2 401 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 EBF3Q9H4W6 596 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 ACSS3Q9H6R3 686 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 IRAK4Q9NWZ3 460 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 SENP1Q9P0U3 644 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 SLC17A6Q9P2U8 582 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 IP6K2Q9UHH9 426 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 IKBKGQ9Y6K9 419 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 COL11A2P13942 1736 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-202ENST00000524773 TRIM49D1C9J1S8 452 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 GSTT1P30711 240 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 AQP5P55064 265 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 TMPRSS15P98073 1019 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 BST1Q10588 318 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 C1orf146Q5VVC0 180 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 TTLL6Q8N841 843 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 NAT8LQ8N9F0 302 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 RBM41Q96IZ5 413 aaKnown RBP13.77□□□□□ -0.21
CAPN1-202ENST00000524773 ZNF341Q9BYN7 854 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 UBE2OQ9C0C9 1292 aaKnown RBP13.77□□□□□ -0.21
CAPN1-202ENST00000524773 POLR3FQ9H1D9 316 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-202ENST00000524773 PIH1D1Q9NWS0 290 aaKnown RBP13.77□□□□□ -0.21
CAPN1-202ENST00000524773 RBAKQ9NYW8 714 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-202ENST00000524773 STX18Q9P2W9 335 aaKnown RBP13.77□□□□□ -0.21
CAPN1-202ENST00000524773 NR2E3Q9Y5X4 410 aa13.77□□□□□ -0.21
CAPN1-202ENST00000524773 SCN9AQ15858 1988 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 LRRIQ4A6NIV6 560 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 LYPLA1O75608 230 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-202ENST00000524773 ZMPSTE24O75844 475 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 RNF8O76064 485 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 ANPEPP15144 967 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 CHRNA5P30532 468 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 EPHB1P54762 984 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 OSTNP61366 133 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 OCRLQ01968 901 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 LMNB2Q03252 620 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 CHI3L2Q15782 390 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 RALGPS1Q5JS13 557 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 WDTC1Q8N5D0 677 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 TRIM11Q96F44 468 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 SRPK1Q96SB4 655 aaKnown RBP13.76□□□□□ -0.21
CAPN1-202ENST00000524773 RMDN3Q96TC7 470 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 EPAS1Q99814 870 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 MRIQ9BWK5 157 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 CYP4F11Q9HBI6 524 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 PCDH9Q9HC56 1237 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 SLC7A8Q9UHI5 535 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 AGO2Q9UKV8 859 aaKnown RBP13.76□□□□□ -0.21
CAPN1-202ENST00000524773 SNCAIPQ9Y6H5 919 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 QSER1Q2KHR3 1735 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 CENPFP49454 3210 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 ARHGAP42A6NI28 874 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 RTN3O95197 1032 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-202ENST00000524773 LMNAP02545 664 aaKnown RBP13.76□□□□□ -0.21
CAPN1-202ENST00000524773 INHBAP08476 426 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 MMP8P22894 467 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 PSMA2P25787 234 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 CAP2P40123 477 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 ETV4P43268 484 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 RAP1GAPP47736 663 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 STYK1Q6J9G0 422 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 C15orf39Q6ZRI6 1047 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 RFX6Q8HWS3 928 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 PPIL6Q8IXY8 311 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 IWS1Q96ST2 819 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 SHOC2Q9UQ13 582 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 UBIAD1Q9Y5Z9 338 aa13.76□□□□□ -0.21
CAPN1-202ENST00000524773 KLHL33A6NCF5 533 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 PMM2O15305 246 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 OR6B1O95007 311 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 PHBP35232 272 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 LAMB3Q13751 1172 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 PGM5Q15124 567 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 C1orf228Q6PIY5 440 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms