RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 IER5LQ5T953 404 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 GJB7Q6PEY0 223 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 TRIM67Q6ZTA4 783 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 DENND5BQ6ZUT9 1274 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 RRAGAQ7L523 313 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 GPRIN1Q7Z2K8 1008 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 FAM114A1Q8IWE2 563 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 UBALD2Q8IYN6 164 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 SCAMP5Q8TAC9 235 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 RIN3Q8TB24 985 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 FAM200AQ8TCP9 573 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 TFAP2BQ92481 460 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 SMARCD2Q92925 531 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 ELSPBP1Q96BH3 223 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 SMARCD1Q96GM5 515 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 SLC22A12Q96S37 553 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 GPR88Q9GZN0 384 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 ATXN3LQ9H3M9 355 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 TASP1Q9H6P5 420 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 DMAP1Q9NPF5 467 aaPredicted RBP12.68□□□□□ -0.38
CLN8-207ENST00000524258 KRT82Q9NSB4 513 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 GCNT4Q9P109 453 aa12.68□□□□□ -0.38
CLN8-207ENST00000524258 SHISA7A6NL88 538 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 SOBPA7XYQ1 873 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 BECN2A8MW95 431 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 O00370 1275 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 GABBR2O75899 941 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 PRAMEF12O95522 483 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 CALCAP01258 141 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 ZDHHC11BP0C7U3 371 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 ADORA2BP29275 332 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 MYL5Q02045 173 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 SIGLEC14Q08ET2 396 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 CETN1Q12798 172 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 IQCB1Q15051 598 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 TPD52L1Q16890 204 aaPredicted RBP12.67□□□□□ -0.38
CLN8-207ENST00000524258 EXOC3L4Q17RC7 722 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 ANO6Q4KMQ2 910 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 GPR158Q5T848 1215 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 TXNDC8Q6A555 127 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 VITQ6UXI7 678 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 GBP6Q6ZN66 633 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 MTSS1LQ765P7 747 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 MON1AQ86VX9 555 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 TTC30AQ86WT1 665 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 ARID3BQ8IVW6 561 aaPredicted RBP12.67□□□□□ -0.38
CLN8-207ENST00000524258 DHX40Q8IX18 779 aaKnown RBP12.67□□□□□ -0.38
CLN8-207ENST00000524258 PPM1KQ8N3J5 372 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 ZSCAN18Q8TBC5 510 aaPredicted RBP12.67□□□□□ -0.38
CLN8-207ENST00000524258 JAKMIP2Q96AA8 810 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 HEXIM2Q96MH2 286 aaKnown RBP12.67□□□□□ -0.38
CLN8-207ENST00000524258 KXD1Q9BQD3 176 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 BPIFA3Q9BQP9 254 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 DUSP16Q9BY84 665 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 SLC2A4RGQ9NR83 387 aa12.67□□□□□ -0.38
CLN8-207ENST00000524258 LIMA1Q9UHB6 759 aaKnown RBP12.67□□□□□ -0.38
CLN8-207ENST00000524258 MAGED2Q9UNF1 606 aaPredicted RBP12.67□□□□□ -0.38
CLN8-207ENST00000524258 ZNF840PA6NDX5 716 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 FAM86C2PA6NEL3 165 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 ARNTLO00327 626 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 CLSTN1O94985 981 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 PAEPP09466 180 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 SRFP11831 508 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 SLC5A3P53794 718 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 MAP3K7CLP57077 242 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 GPC5P78333 572 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 ZXDBP98169 803 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 SNX30Q5VWJ9 437 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 SMYD5Q6GMV2 418 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 TMEM270Q6UE05 265 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 BMP8AQ7Z5Y6 402 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 CREBRFQ8IUR6 639 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 GPIHBP1Q8IV16 184 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 CMTM8Q8IZV2 173 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 NUP93Q8N1F7 819 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 ANKRD52Q8NB46 1076 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 MED10Q9BTT4 135 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 NAA15Q9BXJ9 866 aaKnown RBP12.66□□□□□ -0.38
CLN8-207ENST00000524258 UBXN6Q9BZV1 441 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 PNPLA8Q9NP80 782 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 UBE2TQ9NPD8 197 aaPredicted RBP12.66□□□□□ -0.38
CLN8-207ENST00000524258 COMMD8Q9NX08 183 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 TAB2Q9NYJ8 693 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 UXTQ9UBK9 157 aaPredicted RBP12.66□□□□□ -0.38
CLN8-207ENST00000524258 USP3Q9Y6I4 520 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 F5P12259 2224 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 DENND4CQ5VZ89 1909 aa12.66□□□□□ -0.38
CLN8-207ENST00000524258 ATP8B3O60423 1300 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 KRBA1A5PL33 1030 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 C2orf78A6NCI8 922 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 TMEM221A6NGB7 291 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 HEPACAM2A8MVW5 462 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 M0R296 226 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 TULP2O00295 520 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 OLFM2O95897 454 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 PDGFBP01127 241 aaPredicted RBP12.65□□□□□ -0.38
CLN8-207ENST00000524258 FAM200BP0CF97 657 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 VDRP11473 427 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 ATP1A3P13637 1013 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 NPR3P17342 541 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms