RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	AKAP5	P24588	427 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	RFC1	P35251	1148 aa	Predicted RBP	11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	ITGA8	P53708	1063 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	VCP	P55072	806 aa	Known RBP	11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	DYNLT1	P63172	113 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	SKOR1	P84550	965 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	PURA	Q00577	322 aa	Known RBP	11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	ZNF252P-AS1	Q0IIN9	211 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	BST2	Q10589	180 aa	Known RBP	11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	TFDP2	Q14188	446 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	UAP1	Q16222	522 aa	Predicted RBP	11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	SMTNL2	Q2TAL5	461 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	GNAS	Q5JWF2	1037 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	MFSD7	Q6UXD7	560 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	FAM183BP	Q6ZVS7	135 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	TAOK1	Q7L7X3	1001 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	ZDHHC17	Q8IUH5	632 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	MAP7D3	Q8IWC1	876 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	SH2D3C	Q8N5H7	860 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	EMC1	Q8N766	993 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	JOSD2	Q8TAC2	188 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	PPP1R13L	Q8WUF5	828 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	RSAD2	Q8WXG1	361 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	PIK3R5	Q8WYR1	880 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	DPF3	Q92784	378 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	C18orf25	Q96B23	403 aa	Predicted RBP	11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	HAUS1	Q96CS2	278 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	SELENOS	Q9BQE4	189 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	CALN1	Q9BXU9	219 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	RNF208	Q9H0X6	261 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	CNOT10	Q9H9A5	744 aa	Known RBP	11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	KLK14	Q9P0G3	267 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	HES2	Q9Y543	173 aa		11.3	□□□□□ -0.6
SPIDR-222	ENST00000524006	TCRBV5S1A1T	A0A578	114 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	TLDC2	A0PJX2	215 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	KPNA7	A9QM74	516 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006		E5RJQ4	531 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	RPS6KA5	O75582	802 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	KRT10	P13645	584 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	PDGFRA	P16234	1089 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	CYP3A5	P20815	502 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	ADORA2B	P29275	332 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	HOXA11	P31270	313 aa	Predicted RBP	11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	FLT3	P36888	993 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	ACADSB	P45954	432 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	GABRB2	P47870	512 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	RGS7	P49802	495 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	ZNF143	P52747	638 aa	Predicted RBP	11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	OGDH	Q02218	1023 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	KLF1	Q13351	362 aa	Predicted RBP	11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	CDO1	Q16878	200 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	P3H1	Q32P28	736 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	C6orf118	Q5T5N4	469 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	SCARA3	Q6AZY7	606 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	PCGF5	Q86SE9	256 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	ADGRF2	Q8IZF7	708 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	WDTC1	Q8N5D0	677 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	SLAIN1	Q8ND83	568 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	USP6NL	Q92738	828 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	ACSF2	Q96CM8	615 aa	Predicted RBP	11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	MCRS1	Q96EZ8	462 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	TTC25	Q96NG3	672 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	FAM118B	Q9BPY3	351 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	MRPL45	Q9BRJ2	306 aa	Known RBP	11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	MED10	Q9BTT4	135 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	UNC93B1	Q9H1C4	597 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	PRO3102	Q9H379	93 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	RSAD1	Q9HA92	442 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	NGRN	Q9NPE2	291 aa	Known RBP	11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	PCSK1N	Q9UHG2	260 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	NOVA2	Q9UNW9	492 aa	Known RBP	11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	NOD1	Q9Y239	953 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	EFR3B	Q9Y2G0	817 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	IPP	Q9Y573	584 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	CDY2A	Q9Y6F7	541 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	PATJ	Q8NI35	1801 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	CUL9	Q8IWT3	2517 aa		11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	LAMA2	P24043	3122 aa	Known RBP	11.29	□□□□□ -0.6
SPIDR-222	ENST00000524006	PIK3R2	O00459	728 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	RASGRF2	O14827	1237 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	EIF3H	O15372	352 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	MEFV	O15553	781 aa	Predicted RBP	11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	SHOX2	O60902	331 aa	Predicted RBP	11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	LRCH4	O75427	683 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	IFNB1	P01574	187 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	KCNE1	P15382	129 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	PCK1	P35558	622 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	GNL1	P36915	607 aa	Predicted RBP	11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	CDKN2B	P42772	138 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	GPD2	P43304	727 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	ARSE	P51690	589 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	CDH6	P55285	790 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	PPP2R2A	P63151	447 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	SLC25A11	Q02978	314 aa	Known RBP	11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	GPS1	Q13098	491 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	ARHGAP17	Q68EM7	881 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	SCYL2	Q6P3W7	929 aa		11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	DRICH1	Q6PGQ1	229 aa	Predicted RBP	11.28	□□□□□ -0.6
SPIDR-222	ENST00000524006	CXorf38	Q8TB03	319 aa		11.28	□□□□□ -0.6

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