RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 NETO1Q8TDF5 533 aa9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 OSCP1Q8WVF1 389 aa9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 PAGE5Q96GU1 130 aa9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 PCED1BQ96HM7 432 aa9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 TNIP3Q96KP6 325 aa9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 C8orf48Q96LL4 319 aa9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 CNTNAP3BQ96NU0 1288 aa9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 SLITRK1Q96PX8 696 aa9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 MRPL45Q9BRJ2 306 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 CNTNAP3Q9BZ76 1288 aa9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 CRTAC1Q9NQ79 661 aa9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 NXF1Q9UBU9 619 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 SERTAD1Q9UHV2 236 aa9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 USP18Q9UMW8 372 aa9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 ARHGAP26Q9UNA1 814 aa9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 SLC8A2Q9UPR5 921 aa9.45□□□□□ -0.9
CTNNA1-240ENST00000523912 CHURC1-FNTBB4DL54 471 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 F8VP50 259 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 PDXKO00764 312 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 TRDMT1O14717 391 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 SLC9A3R1O14745 358 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 SLC30A4O14863 429 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 ACTN4O43707 911 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 ATP2C2O75185 946 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 RTN3O95197 1032 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 NFATC1O95644 943 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 NR3C1P04150 777 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 RPN1P04843 607 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 ADRB1P08588 477 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 PTPN1P18031 435 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 HDCP19113 662 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 HOXA6P31267 233 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 SYKP43405 635 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 FNTBP49356 437 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 MYL6P60660 151 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 NOP14P78316 857 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 PKP1Q13835 747 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 SIM2Q14190 667 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 CCDC142Q17RM4 750 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 KMT5BQ4FZB7 885 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 TMEM196Q5HYL7 178 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 TRIM68Q6AZZ1 485 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 DDX42Q86XP3 938 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 SLC9A9Q8IVB4 645 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 KIAA1958Q8N8K9 716 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 ARL14EPQ8N8R7 260 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 B3GALNT2Q8NCR0 500 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 PDZD8Q8NEN9 1154 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 SH3RF2Q8TEC5 729 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 DDX1Q92499 740 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 ACDQ96AP0 544 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 P2RY13Q9BPV8 354 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 MED10Q9BTT4 135 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 IMPG2Q9BZV3 1241 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 SCAND2PQ9GZW5 306 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 VRTNQ9H8Y1 702 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 HPS4Q9NQG7 708 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 TCHHQ07283 1943 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 TICRRQ7Z2Z1 1910 aa9.44□□□□□ -0.9
CTNNA1-240ENST00000523912 NUP210Q8TEM1 1887 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 COL4A2P08572 1712 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 A0A1B0GVL5 298 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 LRRIQ3A6PVS8 624 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 ABL1P00519 1130 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 KRT13P13646 458 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 ARSAP15289 507 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 TCF3P15923 654 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 RPL13P26373 211 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 STK4Q13043 487 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 GAS6Q14393 721 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 CEP135Q66GS9 1140 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 HEATR6Q6AI08 1181 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 SCARA3Q6AZY7 606 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 SCARA5Q6ZMJ2 495 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 KIAA0895Q8NCT3 520 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 CCDC150Q8NCX0 1101 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 TMEM174Q8WUU8 243 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 OVCA2Q8WZ82 227 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 TAF4BQ92750 862 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 SMARCD1Q96GM5 515 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 TTLL2Q9BWV7 592 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 ZNF518BQ9C0D4 1074 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 NACA2Q9H009 215 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 XYLT2Q9H1B5 865 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 SMYD3Q9H7B4 428 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 ECT2Q9H8V3 914 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 DMAP1Q9NPF5 467 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 GCNT4Q9P109 453 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 WNT6Q9Y6F9 365 aa9.43□□□□□ -0.9
CTNNA1-240ENST00000523912 FRYLO94915 3013 aa9.42□□□□□ -0.9
CTNNA1-240ENST00000523912 KMT2BQ9UMN6 2715 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-240ENST00000523912 CNOT1A5YKK6 2376 aaKnown RBP9.42□□□□□ -0.9
CTNNA1-240ENST00000523912 CCDC163A0A0D9SF12 145 aa9.42□□□□□ -0.9
CTNNA1-240ENST00000523912 C2orf78A6NCI8 922 aa9.42□□□□□ -0.9
CTNNA1-240ENST00000523912 ZNF840PA6NDX5 716 aa9.42□□□□□ -0.9
CTNNA1-240ENST00000523912 K7ESF4 209 aa9.42□□□□□ -0.9
CTNNA1-240ENST00000523912 IKBKBO14920 756 aa9.42□□□□□ -0.9
CTNNA1-240ENST00000523912 KLRC4O43908 158 aa9.42□□□□□ -0.9
CTNNA1-240ENST00000523912 RNF40O75150 1001 aa9.42□□□□□ -0.9
CTNNA1-240ENST00000523912 ADH1CP00326 375 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms