RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 TRIM21P19474 475 aaKnown RBP13.59□□□□□ -0.23
VEGFA-224ENST00000523873 USP8P40818 1118 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 ZNF132P52740 706 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 MFAP3P55082 362 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 SYCP1Q15431 976 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 KLHDC7AQ5VTJ3 777 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 ARHGAP17Q68EM7 881 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 CLEC20AQ6ZU45 233 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 GPRIN1Q7Z2K8 1008 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 TMEM150AQ86TG1 271 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 TTC30AQ86WT1 665 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 RNF214Q8ND24 703 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 RSAD2Q8WXG1 361 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 KHSRPQ92945 711 aaKnown RBP eCLIP13.59□□□□□ -0.231e-9■■■□□ 15.1
VEGFA-224ENST00000523873 ACSF2Q96CM8 615 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-224ENST00000523873 SPATA17Q96L03 361 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 PCMTD1Q96MG8 357 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-224ENST00000523873 ZSWIM3Q96MP5 696 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 NAP1L5Q96NT1 182 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-224ENST00000523873 GANQ9H2C0 597 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 ATXN3LQ9H3M9 355 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 DMAP1Q9NPF5 467 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-224ENST00000523873 AVENQ9NQS1 362 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-224ENST00000523873 LIMD1Q9UGP4 676 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 CDH7Q9ULB5 785 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 USTQ9Y2C2 406 aa13.59□□□□□ -0.23
VEGFA-224ENST00000523873 TICRRQ7Z2Z1 1910 aa13.58□□□□□ -0.23
VEGFA-224ENST00000523873 LRRC10BA6NIK2 292 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 HHLA1C9JL84 531 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 GOLGA6L19H0YKK7 550 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 TULP2O00295 520 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 ZNF197O14709 1029 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 F11P03951 625 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 VDRP11473 427 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 RAPGEF1Q13905 1077 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 DRAP1Q14919 205 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-224ENST00000523873 SGO2Q562F6 1265 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 DENND5BQ6ZUT9 1274 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 RNF135Q8IUD6 432 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 LEMD2Q8NC56 503 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 SCAMP5Q8TAC9 235 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 UBA3Q8TBC4 463 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 DUSP16Q9BY84 665 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 GPR88Q9GZN0 384 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 DNAI2Q9GZS0 605 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 SMOC2Q9H3U7 446 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 FAM124BQ9H5Z6 455 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-224ENST00000523873 CSNK1G1Q9HCP0 422 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 FAM207AQ9NSI2 230 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-224ENST00000523873 TSPAN16Q9UKR8 245 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 CNTN6Q9UQ52 1028 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 SIK3Q9Y2K2 1263 aa13.58□□□□□ -0.24
VEGFA-224ENST00000523873 O00370 1275 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 FOXN3O00409 490 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-224ENST00000523873 TNFRSF10BO14763 440 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 CYP26A1O43174 497 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 MICAL2O94851 1124 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 PAEPP09466 180 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 UCHL3P15374 230 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 NPR3P17342 541 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 SLC5A3P53794 718 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 GPR158Q5T848 1215 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 PARM1Q6UWI2 310 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 ENOSF1Q7L5Y1 443 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 ZDHHC14Q8IZN3 488 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 NUP93Q8N1F7 819 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 SHC3Q92529 594 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 KXD1Q9BQD3 176 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 RPP25Q9BUL9 199 aaKnown RBP13.57□□□□□ -0.24
VEGFA-224ENST00000523873 NAA15Q9BXJ9 866 aaKnown RBP13.57□□□□□ -0.24
VEGFA-224ENST00000523873 SMG9Q9H0W8 520 aaKnown RBP13.57□□□□□ -0.24
VEGFA-224ENST00000523873 NLRC4Q9NPP4 1024 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 RTN4Q9NQC3 1192 aaKnown RBP13.57□□□□□ -0.24
VEGFA-224ENST00000523873 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.57□□□□□ -0.244e-7■■■■■ 28.5
VEGFA-224ENST00000523873 EPS15L1Q9UBC2 864 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 MUTYHQ9UIF7 546 aa13.57□□□□□ -0.24
VEGFA-224ENST00000523873 THAP12O43422 761 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 CAVIN2O95810 425 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 SERPINC1P01008 464 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 CFHP08603 1231 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 CDC25CP30307 473 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 ZNF445P59923 1031 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 POLR2FP61218 127 aaKnown RBP13.56□□□□□ -0.24
VEGFA-224ENST00000523873 TPM4P67936 248 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 FANCCQ00597 558 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 PDE4CQ08493 712 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 TAF10Q12962 218 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 FAM78AQ5JUQ0 283 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 TXNDC8Q6A555 127 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 PLCD3Q8N3E9 789 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 FGF14Q92915 247 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 TRMT2BQ96GJ1 504 aaKnown RBP13.56□□□□□ -0.24
VEGFA-224ENST00000523873 MYRFLQ96LU7 910 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 GCNAQ96QF7 691 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 ERGIC2Q96RQ1 377 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 TTLL2Q9BWV7 592 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 SLITRK6Q9H5Y7 841 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 TRPC7Q9HCX4 862 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 PLCB1Q9NQ66 1216 aa13.56□□□□□ -0.24
VEGFA-224ENST00000523873 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms