RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 MYL6P60660 151 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 USP46P62068 366 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 TNNC1P63316 161 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 STK4Q13043 487 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 USP4Q13107 963 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 PSMD2Q13200 908 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 TRPC3Q13507 836 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 LPAL2Q16609 132 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 MDH1BQ5I0G3 518 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 HEATR6Q6AI08 1181 aaKnown RBP17.92■□□□□ 0.46
SPIDR-221ENST00000523814 PKN3Q6P5Z2 889 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 PRR23BQ6ZRT6 265 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 WDR5BQ86VZ2 330 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 GRAMD1CQ8IYS0 662 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 CPA6Q8N4T0 437 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 OR6B3Q8NGW1 331 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 PAGE5Q96GU1 130 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 P2RY13Q9BPV8 354 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 VRTNQ9H8Y1 702 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 DMAC2Q9NW81 257 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 ARHGAP26Q9UNA1 814 aa17.92■□□□□ 0.46
SPIDR-221ENST00000523814 CCDC163A0A0D9SF12 145 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 ZNF840PA6NDX5 716 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 EGFP01133 1207 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 CMA1P23946 247 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 ANXA13P27216 316 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 HOXC13P31276 330 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 AP3M2P53677 418 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 SRSF5Q13243 272 aaKnown RBP17.91■□□□□ 0.46
SPIDR-221ENST00000523814 KCNB1Q14721 858 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 EML3Q32P44 896 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 SLC9A9Q8IVB4 645 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 KIAA1958Q8N8K9 716 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 PLEKHO2Q8TD55 490 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 SH3RF2Q8TEC5 729 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 PARD3BQ8TEW8 1205 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 ATP2A3Q93084 1043 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 SYAP1Q96A49 352 aaPredicted RBP17.91■□□□□ 0.46
SPIDR-221ENST00000523814 EXOC4Q96A65 974 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 TRPM5Q9NZQ8 1165 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 NXF1Q9UBU9 619 aaKnown RBP17.91■□□□□ 0.46
SPIDR-221ENST00000523814 WNT6Q9Y6F9 365 aa17.91■□□□□ 0.46
SPIDR-221ENST00000523814 F8VP50 259 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 PHACTR2O75167 634 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 IFNAR2P48551 515 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 CASP4P49662 377 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 ZXDBP98169 803 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 SPEM2Q0P670 501 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 NR1H3Q13133 447 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 FBXO43Q4G163 708 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 B3GNT5Q9BYG0 378 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 ELOVL4Q9GZR5 314 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 LINC00597Q9H2U6 94 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 DPEP3Q9H4B8 488 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 TMEM30AQ9NV96 361 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 USP25Q9UHP3 1055 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 USP18Q9UMW8 372 aa17.9■□□□□ 0.46
SPIDR-221ENST00000523814 ZNF638Q14966 1978 aaKnown RBP17.9■□□□□ 0.46
SPIDR-221ENST00000523814 A8MXQ7 604 aa17.89■□□□□ 0.45
SPIDR-221ENST00000523814 C4BPAP04003 597 aaKnown RBP17.89■□□□□ 0.45
SPIDR-221ENST00000523814 ATXN1P54253 815 aaKnown RBP17.89■□□□□ 0.45
SPIDR-221ENST00000523814 CACNA2D1P54289 1103 aa17.89■□□□□ 0.45
SPIDR-221ENST00000523814 SLC7A9P82251 487 aa17.89■□□□□ 0.45
SPIDR-221ENST00000523814 KMT5BQ4FZB7 885 aa17.89■□□□□ 0.45
SPIDR-221ENST00000523814 TDRD10Q5VZ19 366 aaKnown RBP17.89■□□□□ 0.45
SPIDR-221ENST00000523814 NAIF1Q69YI7 327 aaPredicted RBP17.89■□□□□ 0.45
SPIDR-221ENST00000523814 CAMKK1Q8N5S9 505 aa17.89■□□□□ 0.45
SPIDR-221ENST00000523814 SPRYD3Q8NCJ5 442 aa17.89■□□□□ 0.45
SPIDR-221ENST00000523814 B3GALNT2Q8NCR0 500 aa17.89■□□□□ 0.45
SPIDR-221ENST00000523814 KIAA0895Q8NCT3 520 aa17.89■□□□□ 0.45
SPIDR-221ENST00000523814 RNF38Q9H0F5 515 aa17.89■□□□□ 0.45
SPIDR-221ENST00000523814 KCTD10Q9H3F6 313 aa17.89■□□□□ 0.45
SPIDR-221ENST00000523814 EXOC1Q9NV70 894 aa17.89■□□□□ 0.45
SPIDR-221ENST00000523814 SLC8A2Q9UPR5 921 aa17.89■□□□□ 0.45
SPIDR-221ENST00000523814 DNAH14Q0VDD8 3507 aa17.89■□□□□ 0.45
SPIDR-221ENST00000523814 GREB1Q4ZG55 1949 aa17.88■□□□□ 0.45
SPIDR-221ENST00000523814 MED19A0JLT2 244 aaPredicted RBP17.88■□□□□ 0.45
SPIDR-221ENST00000523814 LRRIQ3A6PVS8 624 aaPredicted RBP17.88■□□□□ 0.45
SPIDR-221ENST00000523814 PDXKO00764 312 aa17.88■□□□□ 0.45
SPIDR-221ENST00000523814 RNF40O75150 1001 aa17.88■□□□□ 0.45
SPIDR-221ENST00000523814 OLFM2O95897 454 aa17.88■□□□□ 0.45
SPIDR-221ENST00000523814 MYL1P05976 194 aa17.88■□□□□ 0.45
SPIDR-221ENST00000523814 CDH8P55286 799 aa17.88■□□□□ 0.45
SPIDR-221ENST00000523814 CSRP2Q16527 193 aa17.88■□□□□ 0.45
SPIDR-221ENST00000523814 CEP68Q76N32 757 aa17.88■□□□□ 0.45
SPIDR-221ENST00000523814 FAM160A2Q8N612 972 aaPredicted RBP17.88■□□□□ 0.45
SPIDR-221ENST00000523814 TTC16Q8NEE8 873 aa17.88■□□□□ 0.45
SPIDR-221ENST00000523814 EZH1Q92800 747 aaPredicted RBP17.88■□□□□ 0.45
SPIDR-221ENST00000523814 CD101Q93033 1021 aa17.88■□□□□ 0.45
SPIDR-221ENST00000523814 ZNF518BQ9C0D4 1074 aa17.88■□□□□ 0.45
SPIDR-221ENST00000523814 HPSEQ9Y251 543 aa17.88■□□□□ 0.45
SPIDR-221ENST00000523814 ANAPC1Q9H1A4 1944 aa17.88■□□□□ 0.45
SPIDR-221ENST00000523814 A0A1B0GVL5 298 aa17.87■□□□□ 0.45
SPIDR-221ENST00000523814 LEFTY2O00292 366 aa17.87■□□□□ 0.45
SPIDR-221ENST00000523814 CLDN5O00501 218 aa17.87■□□□□ 0.45
SPIDR-221ENST00000523814 VNN1O95497 513 aa17.87■□□□□ 0.45
SPIDR-221ENST00000523814 PFKFB1P16118 471 aa17.87■□□□□ 0.45
SPIDR-221ENST00000523814 PXNP49023 591 aaPredicted RBP17.87■□□□□ 0.45
SPIDR-221ENST00000523814 TAF10Q12962 218 aa17.87■□□□□ 0.45
SPIDR-221ENST00000523814 BIRC3Q13489 604 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms