RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 INCA1Q0VD86 236 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 CCDC142Q17RM4 750 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 TXNDC8Q6A555 127 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 ASCL5Q7RTU5 278 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 NUP93Q8N1F7 819 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 OVCA2Q8WZ82 227 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 LRRC3BQ96PB8 259 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 B3GNT5Q9BYG0 378 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 SMG9Q9H0W8 520 aaKnown RBP18.34■□□□□ 0.53
CCNC-213ENST00000523541 DPEP3Q9H4B8 488 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 METTL14Q9HCE5 456 aaKnown RBP18.34■□□□□ 0.53
CCNC-213ENST00000523541 TRPC7Q9HCX4 862 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 FBXO4Q9UKT5 387 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 NCANO14594 1321 aa18.33■□□□□ 0.53
CCNC-213ENST00000523541 PRR23AA6NEV1 266 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 SHISA7A6NL88 538 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 F8VP50 259 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 PRAMEF12O95522 483 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 SP9P0CG40 484 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 CCNE1P24864 410 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 ASPAP45381 313 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 CSTF1Q05048 431 aaKnown RBP18.33■□□□□ 0.52
CCNC-213ENST00000523541 ZNF528Q3MIS6 628 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 ANKRD40Q6AI12 368 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 CC2D1AQ6P1N0 951 aaPredicted RBP18.33■□□□□ 0.52
CCNC-213ENST00000523541 ZNF687Q8N1G0 1237 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 FBXL13Q8NEE6 735 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 PDZD8Q8NEN9 1154 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 TAS1R2Q8TE23 839 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 USP13Q92995 863 aaPredicted RBP18.33■□□□□ 0.52
CCNC-213ENST00000523541 SMARCD1Q96GM5 515 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 ZFYVE19Q96K21 471 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 CEP63Q96MT8 703 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 SLITRK1Q96PX8 696 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 FAM83CQ9BQN1 747 aa18.33■□□□□ 0.52
CCNC-213ENST00000523541 TADA3O75528 432 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 TRIM49P0CI25 452 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 TRIM49CP0CI26 452 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 HDCP19113 662 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 NDST1P52848 882 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 UBE2HP62256 183 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 FZD5Q13467 585 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 PDGFRLQ15198 375 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 ITPRIPL2Q3MIP1 535 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 FILIP1Q7Z7B0 1213 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 EXOC4Q96A65 974 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 HINFPQ9BQA5 517 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 NT5C1AQ9BXI3 368 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 ZNF518BQ9C0D4 1074 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 NIF3L1Q9GZT8 377 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 SDCBP2Q9H190 292 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 CSNK1G1Q9HCP0 422 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 DMAP1Q9NPF5 467 aaPredicted RBP18.32■□□□□ 0.52
CCNC-213ENST00000523541 GKN1Q9NS71 199 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 RAB20Q9NX57 234 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 IL37Q9NZH6 218 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 GCNT4Q9P109 453 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 COQ4Q9Y3A0 265 aa18.32■□□□□ 0.52
CCNC-213ENST00000523541 F5P12259 2224 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 BICDL2A1A5D9 508 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 ZNF840PA6NDX5 716 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 YWHAQP27348 245 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 SOX9P48436 509 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 MXI1P50539 228 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 WDR44Q5JSH3 913 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 SNX30Q5VWJ9 437 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 SCARA5Q6ZMJ2 495 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 PAQR9Q6ZVX9 377 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 ACOT1Q86TX2 421 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 SYNPOQ8N3V7 929 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 TRIML1Q8N9V2 468 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 MED10Q9BTT4 135 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 LMAN1LQ9HAT1 526 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 ARMCX3Q9UH62 379 aaPredicted RBP18.31■□□□□ 0.52
CCNC-213ENST00000523541 MAN1B1Q9UKM7 699 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 ARHGAP26Q9UNA1 814 aa18.31■□□□□ 0.52
CCNC-213ENST00000523541 NUP210Q8TEM1 1887 aaPredicted RBP18.31■□□□□ 0.52
CCNC-213ENST00000523541 ZFHX2Q9C0A1 2572 aaPredicted RBP18.31■□□□□ 0.52
CCNC-213ENST00000523541 FAM92AA1XBS5 289 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 SPECC1L-ADORA2AF8WAN1 911 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 PMM2O15305 246 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 CKMP06732 381 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 RAP1GAPP47736 663 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 SLC7A9P82251 487 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 RUNX3Q13761 415 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 MORC3Q14149 939 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 LRRC32Q14392 662 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 PPP2R5DQ14738 602 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 DGKKQ5KSL6 1271 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 SPOPLQ6IQ16 392 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 FAM35AQ86V20 835 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 FUKQ8N0W3 1084 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 HNRNPABQ99729 332 aaKnown RBP18.3■□□□□ 0.52
CCNC-213ENST00000523541 FAM126AQ9BYI3 521 aaPredicted RBP18.3■□□□□ 0.52
CCNC-213ENST00000523541 FBXO44Q9H4M3 255 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 APOBEC3GQ9HC16 384 aaKnown RBP18.3■□□□□ 0.52
CCNC-213ENST00000523541 PNPLA8Q9NP80 782 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 GTSE1Q9NYZ3 720 aa18.3■□□□□ 0.52
CCNC-213ENST00000523541 MYO15AQ9UKN7 3530 aa18.29■□□□□ 0.52
CCNC-213ENST00000523541 CLDN5O00501 218 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms