RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PRKAG3Q9UGI9 489 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 MYO10Q9HD67 2058 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 MTMR11A4FU01 709 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 TNFRSF10AO00220 468 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 XYLBO75191 536 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 MICAL2O94851 1124 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 ABLIM3O94929 683 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 C1RP00736 705 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 MMEP08473 750 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 ATF2P15336 505 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 FECHP22830 423 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 NTHL1P78549 312 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 FMO1Q01740 532 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 CDR2Q01850 454 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 CYP27A1Q02318 531 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 MAPRE1Q15691 268 aaKnown RBP12.63□□□□□ -0.39
PVT1-215ENST00000522963 CNGA2Q16280 664 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 NFE2Q16621 373 aaPredicted RBP12.63□□□□□ -0.39
PVT1-215ENST00000522963 GOLGA7BQ2TAP0 167 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 TDRD12Q587J7 1177 aaKnown RBP12.63□□□□□ -0.39
PVT1-215ENST00000522963 TPGS2Q68CL5 300 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 DENND1BQ6P3S1 775 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 LCLAT1Q6UWP7 414 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 GRASPQ7Z6J2 395 aaPredicted RBP12.63□□□□□ -0.39
PVT1-215ENST00000522963 FAM35AQ86V20 835 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 ZNF677Q86XU0 584 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 SPATA2LQ8IUW3 424 aaPredicted RBP12.63□□□□□ -0.39
PVT1-215ENST00000522963 ATAD1Q8NBU5 361 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 CMASQ8NFW8 434 aaPredicted RBP12.63□□□□□ -0.39
PVT1-215ENST00000522963 ZNF707Q96C28 371 aaPredicted RBP12.63□□□□□ -0.39
PVT1-215ENST00000522963 CHP1Q99653 195 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 HNRNPABQ99729 332 aaKnown RBP12.63□□□□□ -0.39
PVT1-215ENST00000522963 AGPAT1Q99943 283 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 MED10Q9BTT4 135 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 RHOBTB2Q9BYZ6 727 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 ZNF518BQ9C0D4 1074 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 ABI2Q9NYB9 513 aaPredicted RBP12.63□□□□□ -0.39
PVT1-215ENST00000522963 AFF4Q9UHB7 1163 aaKnown RBP12.63□□□□□ -0.39
PVT1-215ENST00000522963 TSPAN16Q9UKR8 245 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.63□□□□□ -0.39
PVT1-215ENST00000522963 SLC27A5Q9Y2P5 690 aa12.63□□□□□ -0.39
PVT1-215ENST00000522963 BZW2Q9Y6E2 419 aaKnown RBP12.63□□□□□ -0.39
PVT1-215ENST00000522963 CUL9Q8IWT3 2517 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 MED7O43513 233 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 HNRNPA1P09651 372 aaKnown RBP eCLIP12.62□□□□□ -0.39
PVT1-215ENST00000522963 BDNFP23560 247 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 GBP2P32456 591 aaPredicted RBP12.62□□□□□ -0.39
PVT1-215ENST00000522963 EIF4A3P38919 411 aaKnown RBP12.62□□□□□ -0.39
PVT1-215ENST00000522963 CDK17Q00537 523 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 DUSP4Q13115 394 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 STILQ15468 1287 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 PKDCCQ504Y2 493 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 C4orf50Q6ZRC1 276 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 GET4Q7L5D6 327 aaPredicted RBP12.62□□□□□ -0.39
PVT1-215ENST00000522963 TTC30AQ86WT1 665 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 TMEM139Q8IV31 216 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 PASD1Q8IV76 773 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 TTC9BQ8N6N2 239 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 PCDHB18PQ96TA0 734 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 SEPT5Q99719 369 aaPredicted RBP12.62□□□□□ -0.39
PVT1-215ENST00000522963 CRISPLD1Q9H336 500 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 HCFC1R1Q9NWW0 138 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 PCDHGC3Q9UN70 934 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 NR2E1Q9Y466 385 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 PCDHB5Q9Y5E4 795 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 INSL5Q9Y5Q6 135 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 CLUHO75153 1309 aa12.62□□□□□ -0.39
PVT1-215ENST00000522963 C2CD4DB7Z1M9 353 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 M0QYV0 167 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 DDX3XO00571 662 aaKnown RBP eCLIP12.61□□□□□ -0.39
PVT1-215ENST00000522963 AP1G2O75843 785 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 SOAT2O75908 522 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 PTMAP06454 111 aaKnown RBP12.61□□□□□ -0.39
PVT1-215ENST00000522963 TNFAIP3P21580 790 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 CYP2F1P24903 491 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 CACNA2D1P54289 1103 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 TWF1Q12792 350 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 SMARCB1Q12824 385 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 MAPK8IP2Q13387 824 aaPredicted RBP12.61□□□□□ -0.39
PVT1-215ENST00000522963 MGAT5BQ3V5L5 792 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 CFAP221Q4G0U5 840 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 TCEAL8Q8IYN2 117 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 ELMOD1Q8N336 334 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 TDRD5Q8NAT2 981 aaKnown RBP12.61□□□□□ -0.39
PVT1-215ENST00000522963 ANKRD52Q8NB46 1076 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 UBA3Q8TBC4 463 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 SPPL2BQ8TCT7 592 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 C2orf15Q8WU43 125 aaKnown RBP12.61□□□□□ -0.39
PVT1-215ENST00000522963 FUBP3Q96I24 572 aaKnown RBP eCLIP12.61□□□□□ -0.39
PVT1-215ENST00000522963 SMOQ99835 787 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 BAG1Q99933 345 aaPredicted RBP12.61□□□□□ -0.39
PVT1-215ENST00000522963 CORO1BQ9BR76 489 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 WDR6Q9NNW5 1121 aaKnown RBP12.61□□□□□ -0.39
PVT1-215ENST00000522963 ABCB6Q9NP58 842 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 KRT82Q9NSB4 513 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 TMEM30AQ9NV96 361 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 HESX1Q9UBX0 185 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 ATP8B3O60423 1300 aa12.61□□□□□ -0.39
PVT1-215ENST00000522963 SSU72P8A0A1W2PR75 194 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 FAM170AA1A519 330 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms