RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 NEUROG3Q9Y4Z2 214 aa13.18□□□□□ -0.3
BRF2-204ENST00000522539 DMXL2Q8TDJ6 3036 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 HCRTO43612 131 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 CYP17A1P05093 508 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 PCSK1P29120 753 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 SLC7A9P82251 487 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 TFAMQ00059 246 aaKnown RBP13.17□□□□□ -0.3
BRF2-204ENST00000522539 KCNA1Q09470 495 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 MESP2Q0VG99 397 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 VSTM1Q6UX27 236 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 DPH6Q7L8W6 267 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 SFR1Q86XK3 245 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 SYT12Q8IV01 421 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 ADGRF2Q8IZF7 708 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 KRI1Q8N9T8 703 aaKnown RBP13.17□□□□□ -0.3
BRF2-204ENST00000522539 IL17RCQ8NAC3 791 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 DEFB124Q8NES8 71 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 CACTINQ8WUQ7 758 aaKnown RBP13.17□□□□□ -0.3
BRF2-204ENST00000522539 SNX21Q969T3 373 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 TMEM74BQ9NUR3 256 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 SEL1LQ9UBV2 794 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 SNX9Q9Y5X1 595 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 FASNP49327 2511 aaKnown RBP13.17□□□□□ -0.3
BRF2-204ENST00000522539 PLXND1Q9Y4D7 1925 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 CACNA1EQ15878 2313 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 LAMA5O15230 3695 aa13.17□□□□□ -0.3
BRF2-204ENST00000522539 FAM221BA6H8Z2 402 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 LEFTY2O00292 366 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 ALDH1A2O94788 518 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 BMP15O95972 392 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 LDHAP00338 332 aaKnown RBP13.16□□□□□ -0.3
BRF2-204ENST00000522539 GARTP22102 1010 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 HOXD12P35452 270 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 DPP6P42658 865 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 KIR2DL1P43626 348 aaPredicted RBP13.16□□□□□ -0.3
BRF2-204ENST00000522539 DHPSP49366 369 aaPredicted RBP13.16□□□□□ -0.3
BRF2-204ENST00000522539 SEC13P55735 322 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 USP46P62068 366 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 SEMA3BQ13214 749 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 MAP7D1Q3KQU3 841 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 TRIM61Q5EBN2 209 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 L1TD1Q5T7N2 865 aaKnown RBP13.16□□□□□ -0.3
BRF2-204ENST00000522539 SLC23A3Q6PIS1 610 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 C4orf50Q6ZRC1 276 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 SCN4BQ8IWT1 228 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 CCDC33Q8N5R6 958 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 CSGALNACT2Q8N6G5 542 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 KBTBD7Q8WVZ9 684 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 PIGKQ92643 395 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 FAM84AQ96KN4 292 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 FAM213AQ9BRX8 229 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 CRTAC1Q9NQ79 661 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 MBD1Q9UIS9 605 aaPredicted RBP13.16□□□□□ -0.3
BRF2-204ENST00000522539 MSRB2Q9Y3D2 182 aa13.16□□□□□ -0.3
BRF2-204ENST00000522539 ZNF840PA6NDX5 716 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 SGK1O00141 431 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 ADAM23O75077 832 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 ATP2C2O75185 946 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 OAS1P00973 400 aaKnown RBP13.15□□□□□ -0.3
BRF2-204ENST00000522539 CAPNS1P04632 268 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 LMO2P25791 158 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 PTGER3P43115 390 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 PPP3CCP48454 512 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 NOP14P78316 857 aaKnown RBP13.15□□□□□ -0.3
BRF2-204ENST00000522539 RBP5P82980 135 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 DHCR24Q15392 516 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 RHBDF2Q6PJF5 856 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 DENND5BQ6ZUT9 1274 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 LPCAT2Q7L5N7 544 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 FILIP1Q7Z7B0 1213 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 SFTPA1Q8IWL2 248 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 PHTF2Q8N3S3 785 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 ALLCQ8N6M5 410 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 FRMD1Q8N878 549 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 TTC16Q8NEE8 873 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 WHAMMQ8TF30 809 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 ZCCHC14Q8WYQ9 949 aaKnown RBP13.15□□□□□ -0.3
BRF2-204ENST00000522539 MYLPFQ96A32 169 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 DNAJC19Q96DA6 116 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 SAAL1Q96ER3 474 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 ACCSQ96QU6 501 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 NUSAP1Q9BXS6 441 aaKnown RBP13.15□□□□□ -0.3
BRF2-204ENST00000522539 RNF38Q9H0F5 515 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 OLFML3Q9NRN5 406 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 RBAKQ9NYW8 714 aaPredicted RBP13.15□□□□□ -0.3
BRF2-204ENST00000522539 MAGEC2Q9UBF1 373 aaPredicted RBP13.15□□□□□ -0.3
BRF2-204ENST00000522539 PILRBQ9UKJ0 227 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 CDH9Q9ULB4 789 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 EXOC7Q9UPT5 735 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 PI4KAP42356 2102 aa13.15□□□□□ -0.3
BRF2-204ENST00000522539 GON4LQ3T8J9 2241 aa13.15□□□□□ -0.31
BRF2-204ENST00000522539 FREM2Q5SZK8 3169 aa13.14□□□□□ -0.31
BRF2-204ENST00000522539 MYMKA6NI61 221 aa13.14□□□□□ -0.31
BRF2-204ENST00000522539 SLC9A3R1O14745 358 aaPredicted RBP13.14□□□□□ -0.31
BRF2-204ENST00000522539 HYAL3O43820 417 aaPredicted RBP13.14□□□□□ -0.31
BRF2-204ENST00000522539 KAT7O95251 611 aa13.14□□□□□ -0.31
BRF2-204ENST00000522539 GAP43P17677 238 aa13.14□□□□□ -0.31
BRF2-204ENST00000522539 ENGP17813 658 aa13.14□□□□□ -0.31
BRF2-204ENST00000522539 WARSP23381 471 aaKnown RBP13.14□□□□□ -0.31
BRF2-204ENST00000522539 SLC6A11P48066 632 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms