RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 SCN4BQ8IWT1 228 aa12.32□□□□□ -0.44
IGHV3-60-201ENST00000521678 CCDC33Q8N5R6 958 aa12.32□□□□□ -0.44
IGHV3-60-201ENST00000521678 IL17RCQ8NAC3 791 aa12.32□□□□□ -0.44
IGHV3-60-201ENST00000521678 PIGKQ92643 395 aa12.32□□□□□ -0.44
IGHV3-60-201ENST00000521678 DNAJC19Q96DA6 116 aa12.32□□□□□ -0.44
IGHV3-60-201ENST00000521678 TPSD1Q9BZJ3 242 aa12.32□□□□□ -0.44
IGHV3-60-201ENST00000521678 RNF38Q9H0F5 515 aa12.32□□□□□ -0.44
IGHV3-60-201ENST00000521678 TMEM74BQ9NUR3 256 aa12.32□□□□□ -0.44
IGHV3-60-201ENST00000521678 SEL1LQ9UBV2 794 aa12.32□□□□□ -0.44
IGHV3-60-201ENST00000521678 ITGA11Q9UKX5 1188 aa12.32□□□□□ -0.44
IGHV3-60-201ENST00000521678 NEUROG3Q9Y4Z2 214 aa12.32□□□□□ -0.44
IGHV3-60-201ENST00000521678 SNX9Q9Y5X1 595 aa12.32□□□□□ -0.44
IGHV3-60-201ENST00000521678 ASCC3Q8N3C0 2202 aaKnown RBP12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 LAMA5O15230 3695 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 ZNF840PA6NDX5 716 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 MYMKA6NI61 221 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 LEFTY2O00292 366 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 ALDH1A2O94788 518 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 LDHAP00338 332 aaKnown RBP12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 CYP17A1P05093 508 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 LMO2P25791 158 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 PTGER3P43115 390 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 KIR2DL1P43626 348 aaPredicted RBP12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 SLC6A11P48066 632 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 PPP3CCP48454 512 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 DHPSP49366 369 aaPredicted RBP12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 USP46P62068 366 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 LMAN2Q12907 356 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 SEMA3BQ13214 749 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 COL9A2Q14055 689 aaPredicted RBP12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 KCNB1Q14721 858 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 DHCR24Q15392 516 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 L1TD1Q5T7N2 865 aaKnown RBP12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 PEAR1Q5VY43 1037 aaPredicted RBP12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 ERICH6BQ5W0A0 696 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 SLC23A3Q6PIS1 610 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 RHBDF2Q6PJF5 856 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 C4orf50Q6ZRC1 276 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 USP49Q70CQ1 688 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 LPCAT2Q7L5N7 544 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 SFTPA1Q8IWL2 248 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 ADGRF2Q8IZF7 708 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 DEFB124Q8NES8 71 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 KBTBD7Q8WVZ9 684 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 FAM84AQ96KN4 292 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 ACCSQ96QU6 501 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 PNKPQ96T60 521 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 CRTAC1Q9NQ79 661 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 PPP4R2Q9NY27 417 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 TRPM5Q9NZQ8 1165 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 MAGEC2Q9UBF1 373 aaPredicted RBP12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 MBD1Q9UIS9 605 aaPredicted RBP12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 EXOC7Q9UPT5 735 aa12.31□□□□□ -0.44
IGHV3-60-201ENST00000521678 IGSF10Q6WRI0 2623 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 SGK1O00141 431 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 SLC9A3R1O14745 358 aaPredicted RBP12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 ADAM23O75077 832 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 CAPNS1P04632 268 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 FAM163BP0C2L3 166 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 GAP43P17677 238 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 BDNFP23560 247 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 HOXD12P35452 270 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 TNFRSF4P43489 277 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 SEC13P55735 322 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 NOP14P78316 857 aaKnown RBP12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 UAP1L1Q3KQV9 507 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 TRIM61Q5EBN2 209 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 EMC10Q5UCC4 262 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 DENND5BQ6ZUT9 1274 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 DYMQ7RTS9 669 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 FILIP1Q7Z7B0 1213 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 ALLCQ8N6M5 410 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 FRMD1Q8N878 549 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 TXNDC5Q8NBS9 432 aaKnown RBP12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 RLN3Q8WXF3 142 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 SAAL1Q96ER3 474 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 EPSTI1Q96J88 318 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 SYT15Q9BQS2 421 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 MRPL44Q9H9J2 332 aaKnown RBP12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 PDE11AQ9HCR9 933 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 OLFML3Q9NRN5 406 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 INTS13Q9NVM9 706 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 RBAKQ9NYW8 714 aaPredicted RBP12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 PILRBQ9UKJ0 227 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 CDH9Q9ULB4 789 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 MSRB2Q9Y3D2 182 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 PCDHB13Q9Y5F0 798 aa12.3□□□□□ -0.44
IGHV3-60-201ENST00000521678 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.29□□□□□ -0.44
IGHV3-60-201ENST00000521678 FRMD3A2A2Y4 597 aa12.29□□□□□ -0.44
IGHV3-60-201ENST00000521678 H3BQV1 296 aa12.29□□□□□ -0.44
IGHV3-60-201ENST00000521678 KAT7O95251 611 aa12.29□□□□□ -0.44
IGHV3-60-201ENST00000521678 WARSP23381 471 aaKnown RBP12.29□□□□□ -0.44
IGHV3-60-201ENST00000521678 GJB2P29033 226 aa12.29□□□□□ -0.44
IGHV3-60-201ENST00000521678 GRIA2P42262 883 aa12.29□□□□□ -0.44
IGHV3-60-201ENST00000521678 DPP6P42658 865 aa12.29□□□□□ -0.44
IGHV3-60-201ENST00000521678 BYSLQ13895 437 aaKnown RBP12.29□□□□□ -0.44
IGHV3-60-201ENST00000521678 MAPRE1Q15691 268 aaKnown RBP12.29□□□□□ -0.44
IGHV3-60-201ENST00000521678 LRSAM1Q6UWE0 723 aa12.29□□□□□ -0.44
IGHV3-60-201ENST00000521678 TMEFF1Q8IYR6 380 aa12.29□□□□□ -0.44
IGHV3-60-201ENST00000521678 PHTF2Q8N3S3 785 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms