RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 LIASO43766 372 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 CCDC130P13994 396 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 PDGFRAP16234 1089 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 WARSP23381 471 aaKnown RBP19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 HOXD10P28358 340 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 MIPP30301 263 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 PCK1P35558 622 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 BST2Q10589 180 aaKnown RBP19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 TTMPQ5BVD1 217 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 KCNT1Q5JUK3 1230 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 MAP3K21Q5TCX8 1036 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 TNIP3Q96KP6 325 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 GAD1Q99259 594 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 PSD3Q9NYI0 1048 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 DDX20Q9UHI6 824 aaKnown RBP19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 EFR3BQ9Y2G0 817 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 NEU2Q9Y3R4 380 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 NFS1Q9Y697 457 aa19.41■□□□□ 0.7
TRAPPC9-210ENST00000521667 ITIH2P19823 946 aa19.4■□□□□ 0.7
TRAPPC9-210ENST00000521667 ADORA2BP29275 332 aa19.4■□□□□ 0.7
TRAPPC9-210ENST00000521667 BCAT1P54687 386 aa19.4■□□□□ 0.7
TRAPPC9-210ENST00000521667 SLC6A3Q01959 620 aa19.4■□□□□ 0.7
TRAPPC9-210ENST00000521667 LMNB2Q03252 620 aa19.4■□□□□ 0.7
TRAPPC9-210ENST00000521667 TRNP1Q6NT89 227 aa19.4■□□□□ 0.7
TRAPPC9-210ENST00000521667 DRICH1Q6PGQ1 229 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC9-210ENST00000521667 ZDHHC17Q8IUH5 632 aa19.4■□□□□ 0.7
TRAPPC9-210ENST00000521667 ZNF296Q8WUU4 475 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC9-210ENST00000521667 TSPYL2Q9H2G4 693 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC9-210ENST00000521667 PCSK1NQ9UHG2 260 aa19.4■□□□□ 0.7
TRAPPC9-210ENST00000521667 USP18Q9UMW8 372 aa19.4■□□□□ 0.7
TRAPPC9-210ENST00000521667 GIT1Q9Y2X7 761 aa19.4■□□□□ 0.7
TRAPPC9-210ENST00000521667 THSD7BQ9C0I4 1608 aa19.4■□□□□ 0.7
TRAPPC9-210ENST00000521667 TRUB2O95900 331 aaKnown RBP19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 THP07101 528 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 FAM163BP0C2L3 166 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 KDELR1P24390 212 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 CD52P31358 61 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 PMS2P54278 862 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 CEP85LQ5SZL2 805 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 ZNF365Q70YC5 407 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 RNF180Q86T96 592 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 FAM76AQ8TAV0 307 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 RAET1EQ8TD07 263 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 LPPQ93052 612 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 SNF8Q96H20 258 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 PADI3Q9ULW8 664 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 DPYSL4O14531 572 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 CYB561D2O14569 222 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 PAPSS1O43252 624 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 GRAP2O75791 330 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 GABBR2O75899 941 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 CABYRO75952 493 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 GHRP10912 638 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 ATF2P15336 505 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 IVDP26440 423 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 PTK7Q13308 1070 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 ITGA7Q13683 1181 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 BYSLQ13895 437 aaKnown RBP19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 TRIP13Q15645 432 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 TAZQ16635 292 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 MRPL10Q7Z7H8 261 aaKnown RBP19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 OSTM1Q86WC4 334 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 SCUBE3Q8IX30 993 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 OSBPL7Q9BZF2 842 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 NOD1Q9Y239 953 aa19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC9-210ENST00000521667 CEP350Q5VT06 3117 aa19.38■□□□□ 0.69
TRAPPC9-210ENST00000521667 AGMOQ6ZNB7 445 aa19.38■□□□□ 0.69
TRAPPC9-210ENST00000521667 CCDC89Q8N998 374 aa19.38■□□□□ 0.69
TRAPPC9-210ENST00000521667 CMASQ8NFW8 434 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC9-210ENST00000521667 OR2W6PQ8NHA6 318 aa19.38■□□□□ 0.69
TRAPPC9-210ENST00000521667 SLC2A14Q8TDB8 520 aa19.38■□□□□ 0.69
TRAPPC9-210ENST00000521667 CYLDQ9NQC7 956 aa19.38■□□□□ 0.69
TRAPPC9-210ENST00000521667 DNPEPQ9ULA0 475 aa19.38■□□□□ 0.69
TRAPPC9-210ENST00000521667 ARL5CA6NH57 179 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 GOLGA6L10A6NI86 522 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 ADCY8P40145 1251 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 RPL34P49207 117 aaKnown RBP19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 RAB27AP51159 221 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 AFF1P51825 1210 aaKnown RBP19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 DMTNQ08495 405 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 ZNF844Q08AG5 666 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 SLMAPQ14BN4 828 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 TAF5Q15542 800 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 C15orf59Q2T9L4 293 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 CCDC14Q49A88 953 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 SH3PXD2AQ5TCZ1 1133 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 GSTA5Q7RTV2 222 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 KCTD6Q8NC69 237 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 B3GALNT2Q8NCR0 500 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 KHSRPQ92945 711 aaKnown RBP eCLIP19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 TRAIPQ9BWF2 469 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 PABPC3Q9H361 631 aaKnown RBP19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 MIOSQ9NXC5 875 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 TP73O15350 636 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 FKTNO75072 461 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 ZNF623O75123 536 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 ACLYP53396 1101 aa19.37■□□□□ 0.69
TRAPPC9-210ENST00000521667 CAV1Q03135 178 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms