RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 MAPK9P45984 424 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 RXRGP48443 463 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 MPP1Q00013 466 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 TIAL1Q01085 375 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 SP2Q02086 613 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 NHLH2Q02577 135 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 OCA2Q04671 838 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 NSUN2Q08J23 767 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 ATP1A4Q13733 1029 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 GRM4Q14833 912 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 INSCQ1MX18 579 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 ZNF568Q3ZCX4 644 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 SPATS1Q496A3 300 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 TSHZ3Q63HK5 1081 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 MRNIPQ6NTE8 343 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 FBXO38Q6PIJ6 1188 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 Q6ZRM9 215 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 PLEKHH3Q7Z736 793 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 PCGF5Q86SE9 256 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 SLC44A2Q8IWA5 706 aaPredicted RBP4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 BPIFB1Q8TDL5 484 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 USP13Q92995 863 aaPredicted RBP4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 MIEF2Q96C03 454 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 PNKPQ96T60 521 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 MNTQ99583 582 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 PTDSS2Q9BVG9 487 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 TTYH3Q9C0H2 523 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 TMEM160Q9NX00 188 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 POGKQ9P215 609 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 HERC5Q9UII4 1024 aaKnown RBP4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 HDAC9Q9UKV0 1011 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 NDRG4Q9ULP0 352 aaKnown RBP4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 DAPP1Q9UN19 280 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 CDYLQ9Y232 598 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 CRYL1Q9Y2S2 319 aa4.04□□□□□ -1.76
HMGN1P28-201ENST00000521340 COL15A1P39059 1388 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 RRN3P2A6NIE6 340 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 AQP7P3A6NL99 342 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 PLSCR1O15162 318 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 DNPH1O43598 174 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 MFAP3LO75121 409 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 INMTO95050 263 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 CYP21A2P08686 494 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 KCNA2P16389 499 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 TPH1P17752 444 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 LRPAP1P30533 357 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 APOBEC3AP31941 199 aaPredicted RBP4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 CDK7P50613 346 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 ANXA11P50995 505 aaKnown RBP4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 SCNN1GP51170 649 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 PRKAA2P54646 552 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 LOXL3P58215 753 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 MTAPQ13126 283 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 TBX2Q13207 712 aaPredicted RBP4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 CUL4BQ13620 913 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 DYRK1AQ13627 763 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 SURF1Q15526 300 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 ZXDCQ2QGD7 858 aaPredicted RBP4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 PDCD4Q53EL6 469 aaKnown RBP4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 RETSATQ6NUM9 610 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 SLC30A10Q6XR72 485 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 C1orf122Q6ZSJ8 110 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 LRRTM4Q86VH4 590 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 FTSJ3Q8IY81 847 aaKnown RBP4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 PPP2R3CQ969Q6 453 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 SDCCAG3Q96C92 435 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 MOGAT1Q96PD6 335 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 OR14A2Q96R54 314 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 PRPF18Q99633 342 aaKnown RBP4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 SMOQ99835 787 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 ZSWIM1Q9BR11 485 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 FAM167BQ9BTA0 163 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 PAGR1Q9BTK6 254 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 ABHD16BQ9H3Z7 469 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 VPS45Q9NRW7 570 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 ZFR2Q9UPR6 939 aaKnown RBP4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 SHOC2Q9UQ13 582 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 HPSEQ9Y251 543 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 RAD54BQ9Y620 910 aa4.03□□□□□ -1.76
HMGN1P28-201ENST00000521340 KRTAP23-1A1A580 65 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 HOXC11O43248 304 aaPredicted RBP4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 TAF5LO75529 589 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 ACTL6BO94805 426 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 IPO13O94829 963 aaKnown RBP4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 PRKCBP05771 671 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 POLBP06746 335 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 ITGA2BP08514 1039 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 SPATA31D3P0C874 917 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 INSRRP14616 1297 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 KLRK1P26718 216 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 PPIFP30405 207 aaKnown RBP4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 DDIT3P35638 169 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 FAM189BP81408 668 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 PIGFQ07326 219 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 TIGD6Q17RP2 521 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 UBXN11Q5T124 520 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 TTC22Q5TAA0 569 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 FAXCQ5TGI0 409 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 VPS53Q5VIR6 699 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 TMEM108Q6UXF1 575 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms