RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 ATP2C2O75185 946 aa15.9■□□□□ 0.14
PRKDC-204ENST00000521331 BDNFP23560 247 aa15.9■□□□□ 0.14
PRKDC-204ENST00000521331 LMO2P25791 158 aa15.9■□□□□ 0.14
PRKDC-204ENST00000521331 GBP1P32455 592 aa15.9■□□□□ 0.14
PRKDC-204ENST00000521331 CEBPZQ03701 1054 aaKnown RBP15.9■□□□□ 0.14
PRKDC-204ENST00000521331 RESTQ13127 1097 aa15.9■□□□□ 0.14
PRKDC-204ENST00000521331 TCEAL6Q6IPX3 200 aa15.9■□□□□ 0.14
PRKDC-204ENST00000521331 WDR49Q8IV35 697 aa15.9■□□□□ 0.14
PRKDC-204ENST00000521331 OR5B17Q8NGF7 314 aa15.9■□□□□ 0.14
PRKDC-204ENST00000521331 TCEAL3Q969E4 200 aa15.9■□□□□ 0.14
PRKDC-204ENST00000521331 EDEM2Q9BV94 578 aa15.9■□□□□ 0.14
PRKDC-204ENST00000521331 TTLL2Q9BWV7 592 aa15.9■□□□□ 0.14
PRKDC-204ENST00000521331 LRRC27Q9C0I9 530 aa15.9■□□□□ 0.14
PRKDC-204ENST00000521331 CRTAC1Q9NQ79 661 aa15.9■□□□□ 0.14
PRKDC-204ENST00000521331 DENND4CQ5VZ89 1909 aa15.9■□□□□ 0.14
PRKDC-204ENST00000521331 LEFTY2O00292 366 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 SLC9A3R1O14745 358 aaPredicted RBP15.89■□□□□ 0.13
PRKDC-204ENST00000521331 PDGFRBP09619 1106 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 FAM163BP0C2L3 166 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 OPRD1P41143 372 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 NOP14P78316 857 aaKnown RBP15.89■□□□□ 0.13
PRKDC-204ENST00000521331 SLC7A9P82251 487 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 CYP27A1Q02318 531 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 SLC39A14Q15043 492 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 DAB2IPQ5VWQ8 1189 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 PMS2CLQ68D20 193 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 CBWD2Q8IUF1 395 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 MYCBPAPQ8TBZ2 947 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 PCED1BQ96HM7 432 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 CNOT6LQ96LI5 555 aaKnown RBP15.89■□□□□ 0.13
PRKDC-204ENST00000521331 C8orf48Q96LL4 319 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 MMS19Q96T76 1030 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 PANK2Q9BZ23 570 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 TNMDQ9H2S6 317 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 MMP17Q9ULZ9 603 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 PTPRJQ12913 1337 aa15.89■□□□□ 0.13
PRKDC-204ENST00000521331 A0A087X0B3 334 aa15.88■□□□□ 0.13
PRKDC-204ENST00000521331 ZNF840PA6NDX5 716 aa15.88■□□□□ 0.13
PRKDC-204ENST00000521331 K7EQS6 105 aa15.88■□□□□ 0.13
PRKDC-204ENST00000521331 TACC1O75410 805 aa15.88■□□□□ 0.13
PRKDC-204ENST00000521331 ALDH1A2O94788 518 aa15.88■□□□□ 0.13
PRKDC-204ENST00000521331 SEC13P55735 322 aa15.88■□□□□ 0.13
PRKDC-204ENST00000521331 USP46P62068 366 aa15.88■□□□□ 0.13
PRKDC-204ENST00000521331 MRPS21P82921 87 aaKnown RBP15.88■□□□□ 0.13
PRKDC-204ENST00000521331 ZXDBP98169 803 aa15.88■□□□□ 0.13
PRKDC-204ENST00000521331 C2orf27AQ580R0 203 aa15.88■□□□□ 0.13
PRKDC-204ENST00000521331 FAM173BQ6P4H8 233 aa15.88■□□□□ 0.13
PRKDC-204ENST00000521331 RASSF3Q86WH2 238 aa15.88■□□□□ 0.13
PRKDC-204ENST00000521331 SNX25Q9H3E2 840 aa15.88■□□□□ 0.13
PRKDC-204ENST00000521331 HSPBP1Q9NZL4 362 aa15.88■□□□□ 0.13
PRKDC-204ENST00000521331 OBSL1O75147 1896 aa15.88■□□□□ 0.13
PRKDC-204ENST00000521331 ZNF638Q14966 1978 aaKnown RBP15.87■□□□□ 0.13
PRKDC-204ENST00000521331 C4orf47A7E2U8 309 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 F8VP50 259 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 KHNYNO15037 678 aaKnown RBP15.87■□□□□ 0.13
PRKDC-204ENST00000521331 EIF3DO15371 548 aaKnown RBP eCLIP15.87■□□□□ 0.13
PRKDC-204ENST00000521331 OLFM2O95897 454 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 CYP17A1P05093 508 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 SYT1P21579 422 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 GNL1P36915 607 aaPredicted RBP15.87■□□□□ 0.13
PRKDC-204ENST00000521331 CRY1Q16526 586 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 GAB4Q2WGN9 574 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 HSF5Q4G112 596 aaPredicted RBP15.87■□□□□ 0.13
PRKDC-204ENST00000521331 MDH1BQ5I0G3 518 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 TDRD10Q5VZ19 366 aaKnown RBP15.87■□□□□ 0.13
PRKDC-204ENST00000521331 ANO7Q6IWH7 933 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 PSAPL1Q6NUJ1 521 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 TRAPPC11Q7Z392 1133 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 CYP2U1Q7Z449 544 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 FILIP1Q7Z7B0 1213 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 DDX42Q86XP3 938 aaKnown RBP eCLIP15.87■□□□□ 0.13
PRKDC-204ENST00000521331 ADGRG2Q8IZP9 1017 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 PDILTQ8N807 584 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 SLITRK1Q96PX8 696 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 USP28Q96RU2 1077 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 TPSD1Q9BZJ3 242 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 CUEDC2Q9H467 287 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 CPQQ9Y646 472 aa15.87■□□□□ 0.13
PRKDC-204ENST00000521331 LNP1A1A4G5 178 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 ADH1CP00326 375 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 OAS1P00973 400 aaKnown RBP15.86■□□□□ 0.13
PRKDC-204ENST00000521331 EIF2DP41214 584 aaKnown RBP15.86■□□□□ 0.13
PRKDC-204ENST00000521331 NOVA1P51513 510 aaKnown RBP15.86■□□□□ 0.13
PRKDC-204ENST00000521331 TNNC1P63316 161 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 AMPD3Q01432 767 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 DHCR24Q15392 516 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 SNRNP35Q16560 246 aaKnown RBP15.86■□□□□ 0.13
PRKDC-204ENST00000521331 HS2ST1Q7LGA3 356 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 GLIS3Q8NEA6 775 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 MDGA1Q8NFP4 955 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 OR6B3Q8NGW1 331 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 FNBP1Q96RU3 617 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 PNKPQ96T60 521 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 MRPL45Q9BRJ2 306 aaKnown RBP15.86■□□□□ 0.13
PRKDC-204ENST00000521331 ELOVL4Q9GZR5 314 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 RNF38Q9H0F5 515 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 ZSCAN16Q9H4T2 348 aaPredicted RBP15.86■□□□□ 0.13
PRKDC-204ENST00000521331 TMEM9BQ9NQ34 198 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 INVSQ9Y283 1065 aa15.86■□□□□ 0.13
PRKDC-204ENST00000521331 ATG2BQ96BY7 2078 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms