RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 FGFR1P11362 822 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 LAMP2P13473 410 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 SCG2P13521 617 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 TACR2P21452 398 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 UBA1P22314 1058 aaKnown RBP4.43□□□□□ -1.7
VPS13B-208ENST00000521037 L1CAMP32004 1257 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 ADD2P35612 726 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 SLC16A2P36021 539 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 CLCN4P51793 760 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 GHRHRQ02643 423 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 SSRP1Q08945 709 aaKnown RBP4.43□□□□□ -1.7
VPS13B-208ENST00000521037 PTPN14Q15678 1187 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 TM4SF20Q53R12 229 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 TCEAL6Q6IPX3 200 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 RCSD1Q6JBY9 416 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 KCNT2Q6UVM3 1135 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 PARM1Q6UWI2 310 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 RNF207Q6ZRF8 634 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 PPFIBP1Q86W92 1011 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 FMNL3Q8IVF7 1028 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 EXOC8Q8IYI6 725 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 TAB3Q8N5C8 712 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-208ENST00000521037 CMASQ8NFW8 434 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-208ENST00000521037 TCEAL3Q969E4 200 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 MFSD3Q96ES6 412 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 C8orf48Q96LL4 319 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 SYT3Q9BQG1 590 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 MTA3Q9BTC8 594 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 IER2Q9BTL4 223 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 KATNAL1Q9BW62 490 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 FAM126AQ9BYI3 521 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-208ENST00000521037 PUS7LQ9H0K6 701 aaKnown RBP4.43□□□□□ -1.7
VPS13B-208ENST00000521037 PRKRIP1Q9H875 184 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-208ENST00000521037 GP6Q9HCN6 339 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 GMEB2Q9UKD1 530 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 TNNQ9UQP3 1299 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 ATP8A1Q9Y2Q0 1164 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 FHOD1Q9Y613 1164 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 CDY2AQ9Y6F7 541 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 NUMBLQ9Y6R0 609 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 COL5A1P20908 1838 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-208ENST00000521037 OTOGQ6ZRI0 2925 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 IGSF9BQ9UPX0 1349 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 CCDC163A0A0D9SF12 145 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 PTPDC1A2A3K4 754 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 TBKBP1A7MCY6 615 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 CYR61O00622 381 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 DDAH1O94760 285 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 TTLL1O95922 423 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 IFNGR1P15260 489 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 RPL13P26373 211 aaKnown RBP4.42□□□□□ -1.7
VPS13B-208ENST00000521037 NOP2P46087 812 aaKnown RBP4.42□□□□□ -1.7
VPS13B-208ENST00000521037 NOVA1P51513 510 aaKnown RBP4.42□□□□□ -1.7
VPS13B-208ENST00000521037 PMS1P54277 932 aaKnown RBP4.42□□□□□ -1.7
VPS13B-208ENST00000521037 SATB1Q01826 763 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 SLC9A5Q14940 896 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 MLF2Q15773 248 aaPredicted RBP4.42□□□□□ -1.7
VPS13B-208ENST00000521037 SLC44A4Q53GD3 710 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 CLLU1OSQ5K130 101 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 CCDC158Q5M9N0 1113 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 PRR31Q5SQ13 230 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 AXDND1Q5T1B0 1012 aaPredicted RBP4.42□□□□□ -1.7
VPS13B-208ENST00000521037 C15orf39Q6ZRI6 1047 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 CCDC149Q6ZUS6 474 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 SPATC1Q76KD6 591 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 THNSL2Q86YJ6 484 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 SSH3Q8TE77 659 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 CHURC1Q8WUH1 139 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 CHAC2Q8WUX2 184 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 NINJ1Q92982 152 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 BRF1Q92994 677 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 SGSM3Q96HU1 749 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 DHRS1Q96LJ7 313 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 STRBPQ96SI9 672 aaKnown RBP4.42□□□□□ -1.7
VPS13B-208ENST00000521037 TM9SF2Q99805 663 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 GORASP1Q9BQQ3 440 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 MCMBPQ9BTE3 642 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 MYL10Q9BUA6 226 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 DSCC1Q9BVC3 393 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 EPN3Q9H201 632 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 CD248Q9HCU0 757 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 ST6GALNAC2Q9UJ37 374 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 INVSQ9Y283 1065 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.42□□□□□ -1.7
VPS13B-208ENST00000521037 TSC22D4Q9Y3Q8 395 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 SLC12A7Q9Y666 1083 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 SQORQ9Y6N5 450 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 ZFHX3Q15911 3703 aa4.42□□□□□ -1.7
VPS13B-208ENST00000521037 PLXNB3Q9ULL4 1909 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 A0A1W2PQJ5 194 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 ALG1L2C9J202 215 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 PYCARD-AS1I3L0S3 204 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 PRC1O43663 620 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 RFPL2O75678 378 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 RFPL3O75679 317 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 EIF3JO75822 258 aaKnown RBP4.41□□□□□ -1.7
VPS13B-208ENST00000521037 EPN2O95208 641 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 PAPSS2O95340 614 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-208ENST00000521037 GGPS1O95749 300 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 C8BP07358 591 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms