RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 MAP2K3P46734 347 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 FAM193AP78312 1265 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 POU4F2Q12837 409 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 DUSP4Q13115 394 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 CTTNQ14247 550 aaKnown RBP5.31□□□□□ -1.56
SDCBP-207ENST00000520168 TSGA10IPQ3SY00 556 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 ATF7IP2Q5U623 682 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 NCAPH2Q6IBW4 605 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 ALKAL1Q6UXT8 129 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 LRRC69Q6ZNQ3 347 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 NEK8Q86SG6 692 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 USP37Q86T82 979 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 NAXDQ8IW45 347 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 BLIDQ8IZY5 108 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 ZNF843Q8N446 348 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 FBXL16Q8N461 479 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 KIAA1958Q8N8K9 716 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 ENGASEQ8NFI3 743 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 USP33Q8TEY7 942 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 OSCP1Q8WVF1 389 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 CCDC97Q96F63 343 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-207ENST00000520168 POLR3CQ9BUI4 534 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-207ENST00000520168 LSG1Q9H089 658 aaKnown RBP5.31□□□□□ -1.56
SDCBP-207ENST00000520168 CCDC113Q9H0I3 377 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 FAM124BQ9H5Z6 455 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-207ENST00000520168 ECT2Q9H8V3 914 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 TMEM74BQ9NUR3 256 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 VPS54Q9P1Q0 977 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 CNTN3Q9P232 1028 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 UXTQ9UBK9 157 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-207ENST00000520168 MBD1Q9UIS9 605 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-207ENST00000520168 NAP1L2Q9ULW6 460 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-207ENST00000520168 BOD1L1Q8NFC6 3051 aa5.31□□□□□ -1.56
SDCBP-207ENST00000520168 HECTD1Q9ULT8 2610 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 COL5A1P20908 1838 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 UBR5O95071 2799 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 MTMR11A4FU01 709 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 OTOL1A6NHN0 477 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 K7ELQ4 463 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 ZBTB39O15060 712 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 RRP8O43159 456 aaKnown RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 XPOTO43592 962 aaKnown RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 SH3BP5O60239 455 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 USO1O60763 962 aaKnown RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 ZNF217O75362 1048 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 GJB3O75712 270 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 NFATC1O95644 943 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 PRB1P04280 392 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 TCF3P15923 654 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 TYMPP19971 482 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 ATP2B1P20020 1258 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 ITPKAP23677 461 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 EIF2DP41214 584 aaKnown RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 PTGER3P43115 390 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 IFNAR2P48551 515 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 PDE6CP51160 858 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 RPL6Q02878 288 aaKnown RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 FAM160A1Q05DH4 1040 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 SOX4Q06945 474 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 CLN3Q13286 438 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 MTF1Q14872 753 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 NTRK3Q16288 839 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 INF2Q27J81 1249 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 PREPLQ4J6C6 727 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 EOGTQ5NDL2 527 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 LARP1BQ659C4 914 aaKnown RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 TRIM68Q6AZZ1 485 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 CENPPQ6IPU0 288 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 ARMCX5Q6P1M9 558 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 IL27RAQ6UWB1 636 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 CENPQQ7L2Z9 268 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 TRMT11Q7Z4G4 463 aaKnown RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 LURAP1LQ8IV03 231 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 TMEFF1Q8IYR6 380 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 DEPTORQ8TB45 409 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 SPPL2BQ8TCT7 592 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 MRPS31Q92665 395 aaKnown RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 GLMNQ92990 594 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 WBP1Q96G27 269 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 IFT74Q96LB3 600 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 ACAP3Q96P50 834 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 PGLYRP2Q96PD5 576 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 FNBP1Q96RU3 617 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 CDC6Q99741 560 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 HSD17B14Q9BPX1 270 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 EIF2AK1Q9BQI3 630 aaKnown RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 SLC26A6Q9BXS9 759 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 SLC46A2Q9BY10 475 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 GRIP2Q9C0E4 1043 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 CXCL16Q9H2A7 254 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 PRORYQ9H606 182 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 TMEM206Q9H813 350 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 TTC12Q9H892 705 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 DUS2Q9NX74 493 aaKnown RBP5.3□□□□□ -1.56
SDCBP-207ENST00000520168 RGL1Q9NZL6 768 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 TNFSF13BQ9Y275 285 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 INVSQ9Y283 1065 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 NFE2L3Q9Y4A8 694 aa5.3□□□□□ -1.56
SDCBP-207ENST00000520168 MYO18AQ92614 2054 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms