RNA–Protein interactions for RNA: ENST00000520119.1

IGHV1-17-201, Transcript of immunoglobulin heavy variable 1-17 (pseudogene), humanhuman

BASIC

Gene IGHV1-17, Length 334 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-17-201ENST00000520119 HPS4Q9NQG7 708 aa11.81□□□□□ -0.52
IGHV1-17-201ENST00000520119 CDH9Q9ULB4 789 aa11.81□□□□□ -0.52
IGHV1-17-201ENST00000520119 USP18Q9UMW8 372 aa11.81□□□□□ -0.52
IGHV1-17-201ENST00000520119 ATG2BQ96BY7 2078 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 TRAV19A0A0A6YYK7 116 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 TRDMT1O14717 391 aaKnown RBP11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 ATG13O75143 517 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 TADA3O75528 432 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 USP17L7P0C7H9 530 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 TGM1P22735 817 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 FAM160A1Q05DH4 1040 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 SNRNP35Q16560 246 aaKnown RBP11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 TMEM196Q5HYL7 178 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 SHC4Q6S5L8 630 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 VSTM1Q6UX27 236 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 PRR23BQ6ZRT6 265 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 SCN4BQ8IWT1 228 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 STKLD1Q8NE28 680 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 KBTBD7Q8WVZ9 684 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 SNX21Q969T3 373 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 C7orf25Q9BPX7 421 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 SYT15Q9BQS2 421 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 EBF3Q9H4W6 596 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 AGPAT3Q9NRZ7 376 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 MAGEC2Q9UBF1 373 aaPredicted RBP11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 RALGAPA1Q6GYQ0 2036 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 SPAG17Q6Q759 2223 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 UBE4BO95155 1302 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 PTPRJQ12913 1337 aa11.8□□□□□ -0.52
IGHV1-17-201ENST00000520119 CNOT1A5YKK6 2376 aaKnown RBP11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 OTOL1A6NHN0 477 aaPredicted RBP11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 TGFB1I1O43294 461 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 HCRTO43612 131 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 CKMP06732 381 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 FAM163BP0C2L3 166 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 TNNI1P19237 187 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 DRD1P21728 446 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 WARSP23381 471 aaKnown RBP11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 LMO2P25791 158 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 PDE6CP51160 858 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 DMWDQ09019 674 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 MTF1Q14872 753 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 LPAL2Q16609 132 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 CCDC142Q17RM4 750 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 HEATR6Q6AI08 1181 aaKnown RBP11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 TRIM68Q6AZZ1 485 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 UNC13DQ70J99 1090 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 HS2ST1Q7LGA3 356 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 TRAPPC11Q7Z392 1133 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 CPA6Q8N4T0 437 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 XXYLT1Q8NBI6 393 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 SPATA17Q96L03 361 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 FNBP1Q96RU3 617 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 MMS19Q96T76 1030 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 TRPC7Q9HCX4 862 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 PARD6AQ9NPB6 346 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 C2orf42Q9NWW7 574 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 EHD2Q9NZN4 543 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 CGNQ9P2M7 1197 aaKnown RBP11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 CDV3Q9UKY7 258 aaKnown RBP11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 PCDHB3Q9Y5E6 796 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 ANAPC1Q9H1A4 1944 aa11.79□□□□□ -0.52
IGHV1-17-201ENST00000520119 GREB1Q4ZG55 1949 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 CCDC163A0A0D9SF12 145 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 PVALEFA0A1B0GWK0 134 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 MED19A0JLT2 244 aaPredicted RBP11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 POLR2DO15514 142 aaKnown RBP11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 FOXD2O60548 495 aaPredicted RBP11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 ATP2C2O75185 946 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 TACC1O75410 805 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 PDGFRBP09619 1106 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 DLATP10515 647 aaKnown RBP11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 ARSAP15289 507 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 PFKLP17858 780 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 ANXA13P27216 316 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 GRIK1P39086 918 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 IFNAR2P48551 515 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 PSMC1P62191 440 aaKnown RBP11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 EHHADHQ08426 723 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 SPEM2Q0P670 501 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 KCNB1Q14721 858 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 PSMD6Q15008 389 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 ZNF77Q15935 545 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 FBXO43Q4G163 708 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 ATL3Q6DD88 541 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 FSTL4Q6MZW2 842 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 CEP68Q76N32 757 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 WDR5BQ86VZ2 330 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 RIN3Q8TB24 985 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 MYCBPAPQ8TBZ2 947 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 OSCP1Q8WVF1 389 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 SCFD1Q8WVM8 642 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 ATP2A3Q93084 1043 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 MYLPFQ96A32 169 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 CYP2S1Q96SQ9 504 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 CGRRF1Q99675 332 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 RTKNQ9BST9 563 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 SNX25Q9H3E2 840 aa11.78□□□□□ -0.52
IGHV1-17-201ENST00000520119 CRTAC1Q9NQ79 661 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms