RNA–Protein interactions for RNA: ENST00000519835.5

CPEB4-207, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-207ENST00000519835 KCNK4Q9NYG8 393 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 CNTN3Q9P232 1028 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 CPSF2Q9P2I0 782 aaKnown RBP12.51□□□□□ -0.41
CPEB4-207ENST00000519835 CNTNAP2Q9UHC6 1331 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.51□□□□□ -0.41
CPEB4-207ENST00000519835 MCF2LO15068 1137 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 ONECUT3O60422 494 aaPredicted RBP12.51□□□□□ -0.41
CPEB4-207ENST00000519835 TBX10O75333 385 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 ASS1P00966 412 aaKnown RBP12.51□□□□□ -0.41
CPEB4-207ENST00000519835 BGNP21810 368 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 KCNA3P22001 575 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 PGM1P36871 562 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 RFC5P40937 340 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 NAMPTP43490 491 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 SERPINB4P48594 390 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 BASP1P80723 227 aaKnown RBP12.51□□□□□ -0.41
CPEB4-207ENST00000519835 CDK18Q07002 472 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 GNPTABQ3T906 1256 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 OR52E8Q6IFG1 317 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 FAM83AQ86UY5 434 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 DEPTORQ8TB45 409 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 ZNF184Q99676 751 aaPredicted RBP12.51□□□□□ -0.41
CPEB4-207ENST00000519835 JPH1Q9HDC5 661 aaPredicted RBP12.51□□□□□ -0.41
CPEB4-207ENST00000519835 PDP2Q9P2J9 529 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 CHMP2BQ9UQN3 213 aa12.51□□□□□ -0.41
CPEB4-207ENST00000519835 COL11A1P12107 1806 aaPredicted RBP12.51□□□□□ -0.41
CPEB4-207ENST00000519835 YDJCA8MPS7 323 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 H0YIN7 160 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 APOC4-APOC2K7ER74 178 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 CIB2O75838 187 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 FAM155BO75949 473 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 APOC2P02655 101 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 MYL2P10916 166 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 KCNA2P16389 499 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 GCLCP48506 637 aaPredicted RBP12.5□□□□□ -0.41
CPEB4-207ENST00000519835 GRM1Q13255 1194 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 TBCCQ15814 346 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 TRMT5Q32P41 509 aaKnown RBP12.5□□□□□ -0.41
CPEB4-207ENST00000519835 XKR3Q5GH77 459 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 THEMIS2Q5TEJ8 643 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 GPAT2Q6NUI2 795 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 SWSAP1Q6NVH7 229 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 RSBN1LQ6PCB5 846 aaPredicted RBP12.5□□□□□ -0.41
CPEB4-207ENST00000519835 NET1Q7Z628 596 aaPredicted RBP12.5□□□□□ -0.41
CPEB4-207ENST00000519835 TMPRSS6Q8IU80 811 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 UCMAQ8WVF2 138 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 CDHR1Q96JP9 859 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 C7orf26Q96N11 449 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 NR1H4Q96RI1 486 aaPredicted RBP12.5□□□□□ -0.41
CPEB4-207ENST00000519835 NIF3L1Q9GZT8 377 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 FAM192AQ9GZU8 254 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 SSC5DA1L4H1 1573 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 A0A0B4J269 797 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 TCRBV9S1A1TA0A576 114 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 COPEO14579 308 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 KDELR1P24390 212 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 MTERF2Q49AM1 385 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 DNAL1Q4LDG9 190 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 TTC39BQ5VTQ0 682 aaPredicted RBP12.5□□□□□ -0.41
CPEB4-207ENST00000519835 ATG16L1Q676U5 607 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 VSIG10LQ86VR7 867 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 WDR49Q8IV35 697 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 BRSK2Q8IWQ3 736 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 OR5B17Q8NGF7 314 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 WDR60Q8WVS4 1066 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 SERAC1Q96JX3 654 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 CCDC28BQ9BUN5 200 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 FRMD8Q9BZ67 464 aaPredicted RBP12.5□□□□□ -0.41
CPEB4-207ENST00000519835 HAPLN2Q9GZV7 340 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 WWP1Q9H0M0 922 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 C12orf65Q9H3J6 166 aaKnown RBP12.5□□□□□ -0.41
CPEB4-207ENST00000519835 ZWILCHQ9H900 591 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 ALG13Q9NP73 1137 aaKnown RBP12.5□□□□□ -0.41
CPEB4-207ENST00000519835 PNPLA8Q9NP80 782 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 MKS1Q9NXB0 559 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 SLC9A2Q9UBY0 812 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 DNAJB4Q9UDY4 337 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 C2CD2Q9Y426 696 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 ADGRA2Q96PE1 1338 aa12.5□□□□□ -0.41
CPEB4-207ENST00000519835 KBTBD13C9JR72 458 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 K7ERI5 159 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 LRCH4O75427 683 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 PYGBP11216 843 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 ELK3P41970 407 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 EIF3EP60228 445 aaKnown RBP12.49□□□□□ -0.41
CPEB4-207ENST00000519835 CBLBQ13191 982 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 THOC5Q13769 683 aaKnown RBP12.49□□□□□ -0.41
CPEB4-207ENST00000519835 SH2D5Q6ZV89 423 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 CCDC60Q8IWA6 550 aaPredicted RBP12.49□□□□□ -0.41
CPEB4-207ENST00000519835 SMC1BQ8NDV3 1235 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 RAB3IL1Q8TBN0 382 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 PRR11Q96HE9 360 aaPredicted RBP12.49□□□□□ -0.41
CPEB4-207ENST00000519835 FAM161BQ96MY7 647 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 NMUR2Q9GZQ4 415 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 TMEM39BQ9GZU3 492 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 ARHGEF4Q9NR80 690 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 WDR35Q9P2L0 1181 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 PPME1Q9Y570 386 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 TCRBV7S3A2A0A539 114 aa12.49□□□□□ -0.41
CPEB4-207ENST00000519835 LRRIQ4A6NIV6 560 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms