RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 ASPAP45381 313 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 CDH8P55286 799 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 LRRC63Q05C16 580 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 PPP3CAQ08209 521 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 FZD5Q13467 585 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 ITPRIPL2Q3MIP1 535 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 ZC3H14Q6PJT7 736 aaKnown RBP13.54□□□□□ -0.24
MCPH1-202ENST00000519221 SCARA5Q6ZMJ2 495 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 GPIHBP1Q8IV16 184 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 SMYD4Q8IYR2 804 aaPredicted RBP13.54□□□□□ -0.24
MCPH1-202ENST00000519221 CRYBG2Q8N1P7 616 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 KIAA1958Q8N8K9 716 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 CCDC150Q8NCX0 1101 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 FAM83CQ9BQN1 747 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 B3GNT5Q9BYG0 378 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 ZNF518BQ9C0D4 1074 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 DNAI2Q9GZS0 605 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 SMG9Q9H0W8 520 aaKnown RBP13.54□□□□□ -0.24
MCPH1-202ENST00000519221 SDCBP2Q9H190 292 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 CHRDQ9H2X0 955 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 CYP3A43Q9HB55 503 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 TMEM8AQ9HCN3 771 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 SPATA6Q9NWH7 488 aaPredicted RBP13.54□□□□□ -0.24
MCPH1-202ENST00000519221 TRPM5Q9NZQ8 1165 aa13.54□□□□□ -0.24
MCPH1-202ENST00000519221 SPECC1L-ADORA2AF8WAN1 911 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 SLC16A3O15427 465 aaKnown RBP13.53□□□□□ -0.24
MCPH1-202ENST00000519221 RTN3O95197 1032 aaPredicted RBP13.53□□□□□ -0.24
MCPH1-202ENST00000519221 SP9P0CG40 484 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 TRIM49P0CI25 452 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 TRIM49CP0CI26 452 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 CCNE1P24864 410 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 CTHP32929 405 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 GCLMP48507 274 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 FKBP3Q00688 224 aaKnown RBP13.53□□□□□ -0.24
MCPH1-202ENST00000519221 INCA1Q0VD86 236 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 STIM1Q13586 685 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 LRRC32Q14392 662 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 PDGFRLQ15198 375 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 KRT39Q6A163 491 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 CC2D1AQ6P1N0 951 aaPredicted RBP13.53□□□□□ -0.24
MCPH1-202ENST00000519221 FRMD5Q7Z6J6 570 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 FAM35AQ86V20 835 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 ZC3H3Q8IXZ2 948 aaKnown RBP13.53□□□□□ -0.24
MCPH1-202ENST00000519221 TTC39CQ8N584 583 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 TAS1R2Q8TE23 839 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 OVCA2Q8WZ82 227 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 NKD2Q969F2 451 aaPredicted RBP13.53□□□□□ -0.24
MCPH1-202ENST00000519221 SMARCD1Q96GM5 515 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 SLITRK1Q96PX8 696 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 NIF3L1Q9GZT8 377 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 FAM124BQ9H5Z6 455 aaPredicted RBP13.53□□□□□ -0.24
MCPH1-202ENST00000519221 DMAP1Q9NPF5 467 aaPredicted RBP13.53□□□□□ -0.24
MCPH1-202ENST00000519221 GKN1Q9NS71 199 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 COMMD8Q9NX08 183 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 GCNT4Q9P109 453 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 NDRG2Q9UN36 371 aaKnown RBP13.53□□□□□ -0.24
MCPH1-202ENST00000519221 CCL26Q9Y258 94 aa13.53□□□□□ -0.24
MCPH1-202ENST00000519221 MYOFQ9NZM1 2061 aa13.52□□□□□ -0.24
MCPH1-202ENST00000519221 PSMA7O14818 248 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 GFRA3O60609 400 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 CKMP06732 381 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 HDCP19113 662 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 RAP1GAPP47736 663 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 MXI1P50539 228 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 NDST1P52848 882 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 USP46P62068 366 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 AMPD2Q01433 879 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 USP4Q13107 963 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 DGKKQ5KSL6 1271 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 FOXR2Q6PJQ5 311 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 PAQR9Q6ZVX9 377 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 MAML2Q8IZL2 1156 aaPredicted RBP13.52□□□□□ -0.25
MCPH1-202ENST00000519221 ADSSL1Q8N142 457 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 NUP93Q8N1F7 819 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 PDZD8Q8NEN9 1154 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 ZFYVE19Q96K21 471 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 MED10Q9BTT4 135 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 LMAN1LQ9HAT1 526 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 TRPC7Q9HCX4 862 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 TMEM30AQ9NV96 361 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 GTSE1Q9NYZ3 720 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 ARHGAP26Q9UNA1 814 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 MYO16Q9Y6X6 1858 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 SPAG17Q6Q759 2223 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 SPTBN4Q9H254 2564 aa13.52□□□□□ -0.25
MCPH1-202ENST00000519221 GPR179Q6PRD1 2367 aa13.51□□□□□ -0.25
MCPH1-202ENST00000519221 ZNF840PA6NDX5 716 aa13.51□□□□□ -0.25
MCPH1-202ENST00000519221 PRR23AA6NEV1 266 aa13.51□□□□□ -0.25
MCPH1-202ENST00000519221 CLDN5O00501 218 aa13.51□□□□□ -0.25
MCPH1-202ENST00000519221 CHRNB1P11230 501 aa13.51□□□□□ -0.25
MCPH1-202ENST00000519221 YWHAQP27348 245 aa13.51□□□□□ -0.25
MCPH1-202ENST00000519221 RUNX3Q13761 415 aa13.51□□□□□ -0.25
MCPH1-202ENST00000519221 PPP2R5DQ14738 602 aa13.51□□□□□ -0.25
MCPH1-202ENST00000519221 MTF1Q14872 753 aa13.51□□□□□ -0.25
MCPH1-202ENST00000519221 ZNF77Q15935 545 aa13.51□□□□□ -0.25
MCPH1-202ENST00000519221 SPOPLQ6IQ16 392 aa13.51□□□□□ -0.25
MCPH1-202ENST00000519221 ACOT1Q86TX2 421 aa13.51□□□□□ -0.25
MCPH1-202ENST00000519221 FUKQ8N0W3 1084 aa13.51□□□□□ -0.25
MCPH1-202ENST00000519221 SYNPOQ8N3V7 929 aa13.51□□□□□ -0.25
MCPH1-202ENST00000519221 ARL14EPQ8N8R7 260 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms