RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 MGAM2Q2M2H8 2515 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 ANO9A1A5B4 782 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 VSTM5A8MXK1 200 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 RSPH10B2B2RC85 870 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 ARNTLO00327 626 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 AQP7O14520 342 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 SIGLEC6O43699 453 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 RECQL4O94761 1208 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 ABLIM3O94929 683 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 FBXO21O94952 628 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 FKBP9O95302 570 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 PCCAP05165 728 aaPredicted RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 SCG5P05408 212 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 MYL1P05976 194 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 RSPH10BP0C881 870 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 SFTPCP11686 197 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 EPCAMP16422 314 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 ETV3P41162 512 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 CTSKP43235 329 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 CPT1AP50416 773 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 USP14P54578 494 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 DSG1Q02413 1049 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 LTBQ06643 244 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 EFEMP1Q12805 493 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 TAF7Q15545 349 aaPredicted RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 SHROOM1Q2M3G4 852 aaPredicted RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 ATP13A4Q4VNC1 1196 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 FAM102BQ5T8I3 360 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 FKBP9P1Q75LS8 142 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 RASGRP2Q7LDG7 609 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 CCDC103Q8IW40 242 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 MCEMP1Q8IX19 187 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 SMC5Q8IY18 1101 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 TCEAL8Q8IYN2 117 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 NAGSQ8N159 534 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 CBARPQ8N350 705 aaPredicted RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 CISD2Q8N5K1 135 aaKnown RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 SPATA5Q8NB90 893 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 FRS2Q8WU20 508 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 DCAF4Q8WV16 495 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 RTF1Q92541 710 aaKnown RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 EZH1Q92800 747 aaPredicted RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 LURAP1Q96LR2 239 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 Q96M66 194 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 FAM20AQ96MK3 541 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 DIRC2Q96SL1 478 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 KATNBL1Q9H079 304 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 SEMA6CQ9H3T2 930 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 SFXN1Q9H9B4 322 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 EMC7Q9NPA0 242 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 LUC7LQ9NQ29 371 aaKnown RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 DDX4Q9NQI0 724 aaKnown RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 HEBP1Q9NRV9 189 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 CHST7Q9NS84 486 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 PPARGC1AQ9UBK2 798 aaKnown RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 PUF60Q9UHX1 559 aaKnown RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 EVLQ9UI08 416 aaPredicted RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 TPX2Q9ULW0 747 aaKnown RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 PHTF1Q9UMS5 762 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 ADAMTS5Q9UNA0 930 aa3.83□□□□□ -1.8
CPNE3-204ENST00000517862 SF3B6Q9Y3B4 125 aaKnown RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 KMT2CQ8NEZ4 4911 aaKnown RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 NSD1Q96L73 2696 aaPredicted RBP3.83□□□□□ -1.8
CPNE3-204ENST00000517862 PRRC2CQ9Y520 2896 aaKnown RBP3.82□□□□□ -1.8
CPNE3-204ENST00000517862 PARP14Q460N5 1801 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 B4E1Z4 1266 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 CREB3O43889 395 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 GAS7O60861 476 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 SEMA7AO75326 666 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 PPFIA2O75334 1257 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 LEFTY1O75610 366 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 DDAH2O95865 285 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 CBX7O95931 251 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 LDHAP00338 332 aaKnown RBP3.82□□□□□ -1.8
CPNE3-204ENST00000517862 CPP00450 1065 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 F2P00734 622 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 CKMP06732 381 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 HNRNPA1P09651 372 aaKnown RBP eCLIP3.82□□□□□ -1.8
CPNE3-204ENST00000517862 CT47B1P0C2W7 299 aaPredicted RBP3.82□□□□□ -1.8
CPNE3-204ENST00000517862 RPL17P18621 184 aaKnown RBP3.82□□□□□ -1.8
CPNE3-204ENST00000517862 ITIH2P19823 946 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 ACTN2P35609 894 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 DNM2P50570 870 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 ADCY7P51828 1080 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 EIF4A1P60842 406 aaKnown RBP3.82□□□□□ -1.8
CPNE3-204ENST00000517862 PCBP2Q15366 365 aaKnown RBP eCLIP3.82□□□□□ -1.8
CPNE3-204ENST00000517862 DUSP28Q4G0W2 176 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 SLC23A3Q6PIS1 610 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 ZNF765Q7L2R6 523 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 GLRX5Q86SX6 157 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 PTRH1Q86Y79 214 aaKnown RBP3.82□□□□□ -1.8
CPNE3-204ENST00000517862 NAXDQ8IW45 347 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 CMIPQ8IY22 773 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 ZNF248Q8NDW4 579 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 PIGKQ92643 395 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 COPS5Q92905 334 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 FGF14Q92915 247 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 EVI5LQ96CN4 794 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 SLC39A13Q96H72 371 aa3.82□□□□□ -1.8
CPNE3-204ENST00000517862 KAZALD1Q96I82 304 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms