RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 SLC15A3Q8IY34 581 aa2.04□□□□□ -2.08
RNU6-561P-201ENST00000516222 ZNF548Q8NEK5 533 aaPredicted RBP2.04□□□□□ -2.08
RNU6-561P-201ENST00000516222 ZNF398Q8TD17 642 aa2.04□□□□□ -2.08
RNU6-561P-201ENST00000516222 SREK1Q8WXA9 508 aaKnown RBP2.04□□□□□ -2.08
RNU6-561P-201ENST00000516222 ATG4AQ8WYN0 398 aa2.04□□□□□ -2.08
RNU6-561P-201ENST00000516222 MAP4K1Q92918 833 aa2.04□□□□□ -2.08
RNU6-561P-201ENST00000516222 TNPO1Q92973 898 aaKnown RBP2.04□□□□□ -2.08
RNU6-561P-201ENST00000516222 MMS19Q96T76 1030 aa2.04□□□□□ -2.08
RNU6-561P-201ENST00000516222 VRK1Q99986 396 aaPredicted RBP2.04□□□□□ -2.08
RNU6-561P-201ENST00000516222 TTYH3Q9C0H2 523 aa2.04□□□□□ -2.08
RNU6-561P-201ENST00000516222 SLKQ9H2G2 1235 aaPredicted RBP2.04□□□□□ -2.08
RNU6-561P-201ENST00000516222 VTA1Q9NP79 307 aa2.04□□□□□ -2.08
RNU6-561P-201ENST00000516222 SHOC2Q9UQ13 582 aa2.04□□□□□ -2.08
RNU6-561P-201ENST00000516222 CFAP20Q9Y6A4 193 aaKnown RBP2.04□□□□□ -2.08
RNU6-561P-201ENST00000516222 TTC3P53804 2025 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 TCRBV5S1A1TA0A578 114 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 AP4M1O00189 453 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 FOXN3O00409 490 aaPredicted RBP2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 LINC01565O15544 149 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 MT-CO3P00414 261 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 NGFRP08138 427 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 PHKA1P46020 1223 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 CPA2P48052 419 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 PGGT1BP53609 377 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 STAT4Q14765 748 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 NFATC4Q14934 902 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 ZNF750Q32MQ0 723 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 KRTAP5-4Q6L8H1 288 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 RGS7BPQ6MZT1 257 aaPredicted RBP2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 PGM2L1Q6PCE3 622 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 PPP1R32Q7Z5V6 425 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 UBE2Q1Q7Z7E8 422 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 NR2C2APQ86WQ0 139 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 SKAP1Q86WV1 359 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 RFX6Q8HWS3 928 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 C3orf20Q8ND61 904 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 NGDNQ8NEJ9 315 aaKnown RBP2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 FAM46DQ8NEK8 389 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 OSCP1Q8WVF1 389 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 SOCS4Q8WXH5 440 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 ATP2A3Q93084 1043 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 HS6ST2Q96MM7 605 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 SLC46A1Q96NT5 459 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 LENG8Q96PV6 779 aaPredicted RBP2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 THAP7Q9BT49 309 aaPredicted RBP2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 WDCPQ9H6R7 721 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 DECR2Q9NUI1 292 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 MKS1Q9NXB0 559 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 GABRQQ9UN88 632 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 MRFAP1Q9Y605 127 aa2.03□□□□□ -2.08
RNU6-561P-201ENST00000516222 KLHL33A6NCF5 533 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 CCDC154A6NI56 674 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 TRIM75PA6NK02 468 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 CES2O00748 559 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 ZC3H11AO75152 810 aaKnown RBP eCLIP2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 CNOT3O75175 753 aaKnown RBP2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 CAMTA2O94983 1202 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 FGAP02671 866 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 FGF3P11487 239 aaPredicted RBP2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 XRCC6P12956 609 aaKnown RBP eCLIP2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 LRPAP1P30533 357 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 ALDH7A1P49419 539 aaKnown RBP2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 PDE6CP51160 858 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 KLF1Q13351 362 aaPredicted RBP2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 SNAPC2Q13487 334 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 IL10RAQ13651 578 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 CC2D1BQ5T0F9 858 aaKnown RBP2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 RANBP10Q6VN20 620 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 BCDIN3DQ7Z5W3 292 aaKnown RBP2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 PIP4P1Q86T03 277 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 CUZD1Q86UP6 607 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 CAND1Q86VP6 1230 aaKnown RBP2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 SPATS2Q86XZ4 545 aaKnown RBP2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 FBXL14Q8N1E6 418 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 IQCF1Q8N6M8 205 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 UBR7Q8N806 425 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 WDR66Q8TBY9 1149 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 CHAC2Q8WUX2 184 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 JPH3Q8WXH2 748 aaPredicted RBP2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 SLC25A28Q96A46 364 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 RSPRY1Q96DX4 576 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 LMLNQ96KR4 655 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 SNX15Q9NRS6 342 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 GJB4Q9NTQ9 266 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 ICAM5Q9UMF0 924 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 SSX2IPQ9Y2D8 614 aa2.02□□□□□ -2.09
RNU6-561P-201ENST00000516222 IFITM10A6NMD0 228 aa2.01□□□□□ -2.09
RNU6-561P-201ENST00000516222 MYO1CO00159 1063 aa2.01□□□□□ -2.09
RNU6-561P-201ENST00000516222 SLC16A6O15403 523 aa2.01□□□□□ -2.09
RNU6-561P-201ENST00000516222 HTRA2O43464 458 aaPredicted RBP2.01□□□□□ -2.09
RNU6-561P-201ENST00000516222 PIM1P11309 404 aaPredicted RBP2.01□□□□□ -2.09
RNU6-561P-201ENST00000516222 CYP2C9P11712 490 aa2.01□□□□□ -2.09
RNU6-561P-201ENST00000516222 TBXAS1P24557 533 aaPredicted RBP2.01□□□□□ -2.09
RNU6-561P-201ENST00000516222 KRTAP5-9P26371 169 aa2.01□□□□□ -2.09
RNU6-561P-201ENST00000516222 TACR3P29371 465 aa2.01□□□□□ -2.09
RNU6-561P-201ENST00000516222 PRDX5P30044 214 aa2.01□□□□□ -2.09
RNU6-561P-201ENST00000516222 ENTPD1P49961 510 aa2.01□□□□□ -2.09
RNU6-561P-201ENST00000516222 TOB1P50616 345 aaPredicted RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms