RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 PRRG1O14668 218 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ZNF197O14709 1029 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 GABRDO14764 452 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PAPSS1O43252 624 aaPredicted RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ZBTB43O43298 467 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SUV39H1O43463 412 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 BRINP1O60477 761 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 FOXD2O60548 495 aaPredicted RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 USO1O60763 962 aaKnown RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 OPHN1O60890 802 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CILPO75339 1184 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TULP3O75386 442 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 GABBR2O75899 941 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 BEST1O76090 585 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 RHOBTB1O94844 696 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ERLIN2O94905 339 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 KAT7O95251 611 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TRIM16O95361 564 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TBX18O95935 607 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 IGLV3-19P01714 112 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 LRG1P02750 347 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 KLKB1P03952 638 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CFIP05156 583 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 IGHV4-34P06331 123 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 NFICP08651 508 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ZNF883P0CG24 379 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CXCL8P10145 99 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 MS4A1P11836 297 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 C6P13671 934 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TCF3P15923 654 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CYP11B2P19099 503 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CR2P20023 1033 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ACO1P21399 889 aaKnown RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ACAT1P24752 427 aaKnown RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 LMO2P25791 158 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CDC25AP30304 524 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ADSSP30520 456 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 GBP1P32455 592 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 RPL9P32969 192 aaKnown RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ACSL1P33121 698 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 HOXD13P35453 343 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TIE1P35590 1138 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 RFC5P40937 340 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CTSKP43235 329 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CCR10P46092 362 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 NPTX2P47972 431 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CSNK1EP49674 416 aaKnown RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ACADVLP49748 655 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 DNM2P50570 870 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PDX1P52945 283 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 METAP1P53582 386 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ATP2C1P98194 919 aaPredicted RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CDC42EP1Q00587 391 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 INSM1Q01101 510 aaPredicted RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SETQ01105 290 aaPredicted RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 IL9RQ01113 521 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SEMG2Q02383 582 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 KCNC4Q03721 635 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PPP2R3AQ06190 1150 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 KCNA1Q09470 495 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CCDC173Q0VFZ6 552 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 KCNH2Q12809 1159 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 GRSF1Q12849 480 aaKnown RBP eCLIP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TRAF1Q13077 416 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TARDBPQ13148 414 aaKnown RBP eCLIP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 DMP1Q13316 513 aaPredicted RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PRPF4BQ13523 1007 aaKnown RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 MXD4Q14582 209 aaPredicted RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ZNF268Q14587 947 aaPredicted RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 BMS1Q14692 1282 aaKnown RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 MTF1Q14872 753 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CLCA4Q14CN2 919 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 DHCR24Q15392 516 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 IGFBP7Q16270 282 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 GEN1Q17RS7 908 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 DUOXA1Q1HG43 343 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SLC39A12Q504Y0 691 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PKDCCQ504Y2 493 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 USP39Q53GS9 565 aaKnown RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 LY6G5CQ5SRR4 150 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TPRG1LQ5T0D9 272 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CYP4A22Q5TCH4 519 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ATF7IP2Q5U623 682 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SPATA1Q5VX52 437 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CDCP2Q5VXM1 449 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 C9orf57Q5W0N0 161 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 LYSMD4Q5XG99 296 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 NCAPH2Q6IBW4 605 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PPP4R3AQ6IN85 833 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 FAM171BQ6P995 826 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PADI6Q6TGC4 694 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 MOXD1Q6UVY6 613 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 KDM7AQ6ZMT4 941 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SYNE3Q6ZMZ3 975 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 C1orf186Q6ZWK4 172 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 FILIP1Q7Z7B0 1213 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 RALYLQ86SE5 291 aaKnown RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SPATS2Q86XZ4 545 aaKnown RBP1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 XYLT1Q86Y38 959 aa1.28□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TEX2Q8IWB9 1127 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms