RNA–Protein interactions for RNA: ENST00000515731.1

SDHC-209, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 3

Gene SDHC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-209ENST00000515731 CCDC6Q16204 474 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 ST3GAL2Q16842 350 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 N4BP2L1Q5TBK1 243 aaPredicted RBP17.15■□□□□ 0.34
SDHC-209ENST00000515731 FAM173BQ6P4H8 233 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 CNNM4Q6P4Q7 775 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 DENND5BQ6ZUT9 1274 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 STXBP4Q6ZWJ1 553 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 C11orf74Q86VG3 221 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 RASSF3Q86WH2 238 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 WDR49Q8IV35 697 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 MYCBPAPQ8TBZ2 947 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 LRRC27Q9C0I9 530 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 TNMDQ9H2S6 317 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 LINC00597Q9H2U6 94 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 KBTBD4Q9NVX7 518 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 ANGPTL2Q9UKU9 493 aa17.15■□□□□ 0.34
SDHC-209ENST00000515731 PI4KAP42356 2102 aa17.14■□□□□ 0.33
SDHC-209ENST00000515731 BCLAF3A2AJT9 711 aaKnown RBP17.14■□□□□ 0.33
SDHC-209ENST00000515731 K7EQS6 105 aa17.14■□□□□ 0.33
SDHC-209ENST00000515731 EIF3DO15371 548 aaKnown RBP eCLIP17.14■□□□□ 0.33
SDHC-209ENST00000515731 TACC1O75410 805 aa17.14■□□□□ 0.33
SDHC-209ENST00000515731 BDNFP23560 247 aa17.14■□□□□ 0.33
SDHC-209ENST00000515731 OPRD1P41143 372 aa17.14■□□□□ 0.33
SDHC-209ENST00000515731 ELF2Q15723 593 aa17.14■□□□□ 0.33
SDHC-209ENST00000515731 GAB4Q2WGN9 574 aa17.14■□□□□ 0.33
SDHC-209ENST00000515731 EPM2AIP1Q7L775 607 aaPredicted RBP17.14■□□□□ 0.33
SDHC-209ENST00000515731 ADGRG2Q8IZP9 1017 aa17.14■□□□□ 0.33
SDHC-209ENST00000515731 ZNF507Q8TCN5 953 aa17.14■□□□□ 0.33
SDHC-209ENST00000515731 USP33Q8TEY7 942 aa17.14■□□□□ 0.33
SDHC-209ENST00000515731 MYLPFQ96A32 169 aa17.14■□□□□ 0.33
SDHC-209ENST00000515731 C8orf48Q96LL4 319 aa17.14■□□□□ 0.33
SDHC-209ENST00000515731 USP28Q96RU2 1077 aa17.14■□□□□ 0.33
SDHC-209ENST00000515731 TRPM5Q9NZQ8 1165 aa17.14■□□□□ 0.33
SDHC-209ENST00000515731 R3HCC1Q9Y3T6 440 aaKnown RBP17.14■□□□□ 0.33
SDHC-209ENST00000515731 A0A0A0MRY4 1105 aa17.13■□□□□ 0.33
SDHC-209ENST00000515731 ZNF840PA6NDX5 716 aa17.13■□□□□ 0.33
SDHC-209ENST00000515731 LEFTY2O00292 366 aa17.13■□□□□ 0.33
SDHC-209ENST00000515731 TRIM66O15016 1216 aa17.13■□□□□ 0.33
SDHC-209ENST00000515731 STAU1O95793 577 aaKnown RBP17.13■□□□□ 0.33
SDHC-209ENST00000515731 GRIK1P39086 918 aa17.13■□□□□ 0.33
SDHC-209ENST00000515731 NASPP49321 788 aaPredicted RBP17.13■□□□□ 0.33
SDHC-209ENST00000515731 USP46P62068 366 aa17.13■□□□□ 0.33
SDHC-209ENST00000515731 SNRPFP62306 86 aaKnown RBP17.13■□□□□ 0.33
SDHC-209ENST00000515731 E2F4Q16254 413 aa17.13■□□□□ 0.33
SDHC-209ENST00000515731 LMBRD2Q68DH5 695 aaPredicted RBP17.13■□□□□ 0.33
SDHC-209ENST00000515731 TRAPPC11Q7Z392 1133 aa17.13■□□□□ 0.33
SDHC-209ENST00000515731 CBWD2Q8IUF1 395 aa17.13■□□□□ 0.33
SDHC-209ENST00000515731 PCED1BQ96HM7 432 aa17.13■□□□□ 0.33
SDHC-209ENST00000515731 INTS4Q96HW7 963 aaKnown RBP17.13■□□□□ 0.33
SDHC-209ENST00000515731 PANK2Q9BZ23 570 aa17.13■□□□□ 0.33
SDHC-209ENST00000515731 CUEDC2Q9H467 287 aa17.13■□□□□ 0.33
SDHC-209ENST00000515731 ZSCAN16Q9H4T2 348 aaPredicted RBP17.13■□□□□ 0.33
SDHC-209ENST00000515731 HSPBP1Q9NZL4 362 aa17.13■□□□□ 0.33
SDHC-209ENST00000515731 KCNK5O95279 499 aa17.12■□□□□ 0.33
SDHC-209ENST00000515731 CST3P01034 146 aaPredicted RBP17.12■□□□□ 0.33
SDHC-209ENST00000515731 CHRM1P11229 460 aaPredicted RBP17.12■□□□□ 0.33
SDHC-209ENST00000515731 ANXA13P27216 316 aa17.12■□□□□ 0.33
SDHC-209ENST00000515731 EIF2DP41214 584 aaKnown RBP17.12■□□□□ 0.33
SDHC-209ENST00000515731 PSMC1P62191 440 aaKnown RBP17.12■□□□□ 0.33
SDHC-209ENST00000515731 MRPS21P82921 87 aaKnown RBP17.12■□□□□ 0.33
SDHC-209ENST00000515731 CEBPZQ03701 1054 aaKnown RBP17.12■□□□□ 0.33
SDHC-209ENST00000515731 PMS2CLQ68D20 193 aa17.12■□□□□ 0.33
SDHC-209ENST00000515731 GLIS3Q8NEA6 775 aa17.12■□□□□ 0.33
SDHC-209ENST00000515731 CNOT6LQ96LI5 555 aaKnown RBP17.12■□□□□ 0.33
SDHC-209ENST00000515731 TRIM9Q9C026 710 aa17.12■□□□□ 0.33
SDHC-209ENST00000515731 RNF38Q9H0F5 515 aa17.12■□□□□ 0.33
SDHC-209ENST00000515731 SMOC1Q9H4F8 434 aa17.12■□□□□ 0.33
SDHC-209ENST00000515731 MMP17Q9ULZ9 603 aa17.12■□□□□ 0.33
SDHC-209ENST00000515731 MTMR6Q9Y217 621 aa17.12■□□□□ 0.33
SDHC-209ENST00000515731 NME7Q9Y5B8 376 aa17.12■□□□□ 0.33
SDHC-209ENST00000515731 MYH10P35580 1976 aa17.11■□□□□ 0.33
SDHC-209ENST00000515731 ASPMQ8IZT6 3477 aa17.11■□□□□ 0.33
SDHC-209ENST00000515731 SLC9A3R1O14745 358 aaPredicted RBP17.11■□□□□ 0.33
SDHC-209ENST00000515731 DCLK1O15075 740 aa17.11■□□□□ 0.33
SDHC-209ENST00000515731 TGFB1I1O43294 461 aa17.11■□□□□ 0.33
SDHC-209ENST00000515731 CAVIN2O95810 425 aa17.11■□□□□ 0.33
SDHC-209ENST00000515731 OAS1P00973 400 aaKnown RBP17.11■□□□□ 0.33
SDHC-209ENST00000515731 PDGFRBP09619 1106 aa17.11■□□□□ 0.33
SDHC-209ENST00000515731 GNL1P36915 607 aaPredicted RBP17.11■□□□□ 0.33
SDHC-209ENST00000515731 DGKEP52429 567 aa17.11■□□□□ 0.33
SDHC-209ENST00000515731 PSMD6Q15008 389 aa17.11■□□□□ 0.33
SDHC-209ENST00000515731 HSF5Q4G112 596 aaPredicted RBP17.11■□□□□ 0.33
SDHC-209ENST00000515731 USP39Q53GS9 565 aaKnown RBP17.11■□□□□ 0.33
SDHC-209ENST00000515731 RNF43Q68DV7 783 aa17.11■□□□□ 0.33
SDHC-209ENST00000515731 TSTD1Q8NFU3 115 aa17.11■□□□□ 0.33
SDHC-209ENST00000515731 OLIG1Q8TAK6 271 aa17.11■□□□□ 0.33
SDHC-209ENST00000515731 CHAMP1Q96JM3 812 aa17.11■□□□□ 0.33
SDHC-209ENST00000515731 DUSP9Q99956 384 aaKnown RBP17.11■□□□□ 0.33
SDHC-209ENST00000515731 ZZEF1O43149 2961 aa17.1■□□□□ 0.33
SDHC-209ENST00000515731 PPP6R2O75170 966 aa17.1■□□□□ 0.33
SDHC-209ENST00000515731 CYP17A1P05093 508 aa17.1■□□□□ 0.33
SDHC-209ENST00000515731 AMPD3Q01432 767 aa17.1■□□□□ 0.33
SDHC-209ENST00000515731 CYP27A1Q02318 531 aa17.1■□□□□ 0.33
SDHC-209ENST00000515731 CREB5Q02930 508 aa17.1■□□□□ 0.33
SDHC-209ENST00000515731 EHHADHQ08426 723 aa17.1■□□□□ 0.33
SDHC-209ENST00000515731 PSMD2Q13200 908 aa17.1■□□□□ 0.33
SDHC-209ENST00000515731 CRY1Q16526 586 aa17.1■□□□□ 0.33
SDHC-209ENST00000515731 SNRNP35Q16560 246 aaKnown RBP17.1■□□□□ 0.33
SDHC-209ENST00000515731 FILIP1Q7Z7B0 1213 aa17.1■□□□□ 0.33
SDHC-209ENST00000515731 PDILTQ8N807 584 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms