RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 GIPC2Q8TF65 315 aa15.97■□□□□ 0.15
PDCD6-211ENST00000515587 SPATA17Q96L03 361 aa15.97■□□□□ 0.15
PDCD6-211ENST00000515587 C8orf48Q96LL4 319 aa15.97■□□□□ 0.15
PDCD6-211ENST00000515587 NECTIN4Q96NY8 510 aa15.97■□□□□ 0.15
PDCD6-211ENST00000515587 EDEM3Q9BZQ6 932 aa15.97■□□□□ 0.15
PDCD6-211ENST00000515587 S1PR5Q9H228 398 aa15.97■□□□□ 0.15
PDCD6-211ENST00000515587 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.97■□□□□ 0.15
PDCD6-211ENST00000515587 PATJQ8NI35 1801 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 F8VP50 259 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 PAPLNO95428 1278 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 CCDC172P0C7W6 258 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 CSH1P0DML2 217 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 CSH2P0DML3 217 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 NPR3P17342 541 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 ATF6P18850 670 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 BRD2P25440 801 aaKnown RBP15.96■□□□□ 0.15
PDCD6-211ENST00000515587 SOX5P35711 763 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 CNGA2Q16280 664 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 FIGNQ5HY92 759 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 LCLAT1Q6UWP7 414 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 PAQR9Q6ZVX9 377 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 ANKRD52Q8NB46 1076 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 LEMD2Q8NC56 503 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 ZNF397Q8NF99 534 aaPredicted RBP15.96■□□□□ 0.15
PDCD6-211ENST00000515587 ZNF707Q96C28 371 aaPredicted RBP15.96■□□□□ 0.15
PDCD6-211ENST00000515587 CORO1BQ9BR76 489 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 DUSP16Q9BY84 665 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 GPR88Q9GZN0 384 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 ASAH2Q9NR71 780 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 TSPAN16Q9UKR8 245 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 MYO6Q9UM54 1294 aa15.96■□□□□ 0.15
PDCD6-211ENST00000515587 USP15Q9Y4E8 981 aaPredicted RBP15.96■□□□□ 0.15
PDCD6-211ENST00000515587 GREB1Q4ZG55 1949 aa15.96■□□□□ 0.14
PDCD6-211ENST00000515587 SLC38A8A6NNN8 435 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 O00370 1275 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 GFPT2O94808 682 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 FGF19O95750 216 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 TPM1P09493 284 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 PNMA6AP0CW24 399 aaPredicted RBP15.95■□□□□ 0.14
PDCD6-211ENST00000515587 KRT9P35527 623 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 PBX1P40424 430 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 GPR15P49685 360 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 PDE6CP51160 858 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 BCAT1P54687 386 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 MAP3K7CLP57077 242 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 JAM2P57087 298 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 BST2Q10589 180 aaKnown RBP15.95■□□□□ 0.14
PDCD6-211ENST00000515587 PABPC1LQ4VXU2 614 aaKnown RBP15.95■□□□□ 0.14
PDCD6-211ENST00000515587 IER5LQ5T953 404 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 CYP4A22Q5TCH4 519 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 SPECC1LQ69YQ0 1117 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 GRASPQ7Z6J2 395 aaPredicted RBP15.95■□□□□ 0.14
PDCD6-211ENST00000515587 DNAJB7Q7Z6W7 309 aaPredicted RBP15.95■□□□□ 0.14
PDCD6-211ENST00000515587 GPR152Q8TDT2 470 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 PSMG2Q969U7 264 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 CSNK1G1Q9HCP0 422 aa15.95■□□□□ 0.14
PDCD6-211ENST00000515587 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.95■□□□□ 0.14
PDCD6-211ENST00000515587 ZNF638Q14966 1978 aaKnown RBP15.95■□□□□ 0.14
PDCD6-211ENST00000515587 ITIH6Q6UXX5 1313 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 CFAP54Q96N23 3096 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 M0QYV0 167 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 ZNF197O14709 1029 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 MBTPS2O43462 519 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 RTN3O95197 1032 aaPredicted RBP15.94■□□□□ 0.14
PDCD6-211ENST00000515587 SETSIPP0DME0 302 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 CLCN1P35523 988 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 CACNA2D1P54289 1103 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 FOXK2Q01167 660 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 TRIM14Q14142 442 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 CBX2Q14781 532 aaPredicted RBP15.94■□□□□ 0.14
PDCD6-211ENST00000515587 SDHAF4Q5VUM1 108 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 CLEC20AQ6ZU45 233 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 DENND5BQ6ZUT9 1274 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 PDZD4Q76G19 769 aaPredicted RBP15.94■□□□□ 0.14
PDCD6-211ENST00000515587 SLC47A2Q86VL8 602 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 NUP93Q8N1F7 819 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 ZNF606Q8WXB4 792 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 TFAP2BQ92481 460 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 GCNAQ96QF7 691 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 KCNK16Q96T55 309 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 SMOQ99835 787 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 NUCKS1Q9H1E3 243 aaKnown RBP15.94■□□□□ 0.14
PDCD6-211ENST00000515587 PDCL3Q9H2J4 239 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 UXTQ9UBK9 157 aaPredicted RBP15.94■□□□□ 0.14
PDCD6-211ENST00000515587 MAGED2Q9UNF1 606 aaPredicted RBP15.94■□□□□ 0.14
PDCD6-211ENST00000515587 DOCK6Q96HP0 2047 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 CLUHO75153 1309 aa15.94■□□□□ 0.14
PDCD6-211ENST00000515587 USP34Q70CQ2 3546 aa15.93■□□□□ 0.14
PDCD6-211ENST00000515587 A0A1W2PQJ5 194 aa15.93■□□□□ 0.14
PDCD6-211ENST00000515587 MICAL2O94851 1124 aa15.93■□□□□ 0.14
PDCD6-211ENST00000515587 CALCAP01258 141 aa15.93■□□□□ 0.14
PDCD6-211ENST00000515587 RHOP08100 348 aa15.93■□□□□ 0.14
PDCD6-211ENST00000515587 MYL4P12829 197 aa15.93■□□□□ 0.14
PDCD6-211ENST00000515587 FERP16591 822 aa15.93■□□□□ 0.14
PDCD6-211ENST00000515587 ZP2Q05996 745 aa15.93■□□□□ 0.14
PDCD6-211ENST00000515587 MEA1Q16626 185 aa15.93■□□□□ 0.14
PDCD6-211ENST00000515587 VSTM4Q8IW00 320 aa15.93■□□□□ 0.14
PDCD6-211ENST00000515587 UBA3Q8TBC4 463 aa15.93■□□□□ 0.14
PDCD6-211ENST00000515587 TRMT2BQ96GJ1 504 aaKnown RBP15.93■□□□□ 0.14
PDCD6-211ENST00000515587 UBXN6Q9BZV1 441 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms