RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 USP33Q8TEY7 942 aa16.06■□□□□ 0.16
DDR1-278ENST00000515233 NOC3LQ8WTT2 800 aaKnown RBP16.06■□□□□ 0.16
DDR1-278ENST00000515233 MYLPFQ96A32 169 aa16.06■□□□□ 0.16
DDR1-278ENST00000515233 CHAMP1Q96JM3 812 aa16.06■□□□□ 0.16
DDR1-278ENST00000515233 USP28Q96RU2 1077 aa16.06■□□□□ 0.16
DDR1-278ENST00000515233 LRRC27Q9C0I9 530 aa16.06■□□□□ 0.16
DDR1-278ENST00000515233 TRPM5Q9NZQ8 1165 aa16.06■□□□□ 0.16
DDR1-278ENST00000515233 ANGPTL2Q9UKU9 493 aa16.06■□□□□ 0.16
DDR1-278ENST00000515233 PTPRDP23468 1912 aa16.06■□□□□ 0.16
DDR1-278ENST00000515233 LAMA1P25391 3075 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 K7EQS6 105 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 LEFTY2O00292 366 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 TRIM66O15016 1216 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 DCLK1O15075 740 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 CST3P01034 146 aaPredicted RBP16.05■□□□□ 0.16
DDR1-278ENST00000515233 PDGFRBP09619 1106 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 DGKEP52429 567 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 USP46P62068 366 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 PSMC1P62191 440 aaKnown RBP16.05■□□□□ 0.16
DDR1-278ENST00000515233 SLC7A9P82251 487 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 GAB4Q2WGN9 574 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 C11orf74Q86VG3 221 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 RASSF3Q86WH2 238 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 MYCBPAPQ8TBZ2 947 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 PCED1BQ96HM7 432 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 RNF38Q9H0F5 515 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 TNMDQ9H2S6 317 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 SMOC1Q9H4F8 434 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 ZSCAN16Q9H4T2 348 aaPredicted RBP16.05■□□□□ 0.16
DDR1-278ENST00000515233 KBTBD4Q9NVX7 518 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 HSPBP1Q9NZL4 362 aa16.05■□□□□ 0.16
DDR1-278ENST00000515233 ZNF840PA6NDX5 716 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 EIF3DO15371 548 aaKnown RBP eCLIP16.04■□□□□ 0.16
DDR1-278ENST00000515233 TACC1O75410 805 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 KCNK5O95279 499 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 CAVIN2O95810 425 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 OLFM2O95897 454 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 ANXA13P27216 316 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 HOXD13P35453 343 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 GNL1P36915 607 aaPredicted RBP16.04■□□□□ 0.16
DDR1-278ENST00000515233 CYP27A1Q02318 531 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 USP39Q53GS9 565 aaKnown RBP16.04■□□□□ 0.16
DDR1-278ENST00000515233 RNF43Q68DV7 783 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 TRAPPC11Q7Z392 1133 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 PDILTQ8N807 584 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 GLIS3Q8NEA6 775 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 TSTD1Q8NFU3 115 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 ZNF507Q8TCN5 953 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 C8orf48Q96LL4 319 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 MMS19Q96T76 1030 aa16.04■□□□□ 0.16
DDR1-278ENST00000515233 CNOT1A5YKK6 2376 aaKnown RBP16.04■□□□□ 0.16
DDR1-278ENST00000515233 A0A0A0MRY4 1105 aa16.03■□□□□ 0.16
DDR1-278ENST00000515233 KCNA4P22459 653 aa16.03■□□□□ 0.16
DDR1-278ENST00000515233 NASPP49321 788 aaPredicted RBP16.03■□□□□ 0.16
DDR1-278ENST00000515233 MRPS21P82921 87 aaKnown RBP16.03■□□□□ 0.16
DDR1-278ENST00000515233 CREB5Q02930 508 aa16.03■□□□□ 0.16
DDR1-278ENST00000515233 E2F4Q16254 413 aa16.03■□□□□ 0.16
DDR1-278ENST00000515233 CRY1Q16526 586 aa16.03■□□□□ 0.16
DDR1-278ENST00000515233 C2orf27AQ580R0 203 aa16.03■□□□□ 0.16
DDR1-278ENST00000515233 PMS2CLQ68D20 193 aa16.03■□□□□ 0.16
DDR1-278ENST00000515233 TCEAL6Q6IPX3 200 aa16.03■□□□□ 0.16
DDR1-278ENST00000515233 EPM2AIP1Q7L775 607 aaPredicted RBP16.03■□□□□ 0.16
DDR1-278ENST00000515233 TCEAL3Q969E4 200 aa16.03■□□□□ 0.16
DDR1-278ENST00000515233 INTS4Q96HW7 963 aaKnown RBP16.03■□□□□ 0.16
DDR1-278ENST00000515233 CNOT6LQ96LI5 555 aaKnown RBP16.03■□□□□ 0.16
DDR1-278ENST00000515233 TRIM9Q9C026 710 aa16.03■□□□□ 0.16
DDR1-278ENST00000515233 CUEDC2Q9H467 287 aa16.03■□□□□ 0.16
DDR1-278ENST00000515233 MMP17Q9ULZ9 603 aa16.03■□□□□ 0.16
DDR1-278ENST00000515233 MTMR6Q9Y217 621 aa16.03■□□□□ 0.16
DDR1-278ENST00000515233 NUP205Q92621 2012 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 F8VP50 259 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 SLC9A3R1O14745 358 aaPredicted RBP16.02■□□□□ 0.16
DDR1-278ENST00000515233 TGFB1I1O43294 461 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 STAU1O95793 577 aaKnown RBP16.02■□□□□ 0.16
DDR1-278ENST00000515233 OAS1P00973 400 aaKnown RBP16.02■□□□□ 0.16
DDR1-278ENST00000515233 PTPN1P18031 435 aaKnown RBP16.02■□□□□ 0.16
DDR1-278ENST00000515233 GBP1P32455 592 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 EIF2DP41214 584 aaKnown RBP16.02■□□□□ 0.16
DDR1-278ENST00000515233 SNRPFP62306 86 aaKnown RBP16.02■□□□□ 0.16
DDR1-278ENST00000515233 AMPD3Q01432 767 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 DHCR24Q15392 516 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 SNRNP35Q16560 246 aaKnown RBP16.02■□□□□ 0.16
DDR1-278ENST00000515233 TDRD10Q5VZ19 366 aaKnown RBP16.02■□□□□ 0.16
DDR1-278ENST00000515233 CNNM4Q6P4Q7 775 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 HS2ST1Q7LGA3 356 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 FILIP1Q7Z7B0 1213 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 RDH13Q8NBN7 331 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 LINC00301Q8NCQ3 95 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 HPS3Q969F9 1004 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 MRPL45Q9BRJ2 306 aaKnown RBP16.02■□□□□ 0.16
DDR1-278ENST00000515233 EDEM2Q9BV94 578 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 SNX25Q9H3E2 840 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 NME7Q9Y5B8 376 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 CPQQ9Y646 472 aa16.02■□□□□ 0.16
DDR1-278ENST00000515233 MAP1BP46821 2468 aaKnown RBP16.02■□□□□ 0.15
DDR1-278ENST00000515233 ABCA7Q8IZY2 2146 aa16.01■□□□□ 0.15
DDR1-278ENST00000515233 THADAQ6YHU6 1953 aa16.01■□□□□ 0.15
DDR1-278ENST00000515233 ANTXRLA6NF34 631 aa16.01■□□□□ 0.15
DDR1-278ENST00000515233 CYP17A1P05093 508 aa16.01■□□□□ 0.15
DDR1-278ENST00000515233 TNNI1P19237 187 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms