RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 RUNX3Q13761 415 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 BECN1Q14457 450 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 MTF1Q14872 753 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 PON2Q15165 354 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 ZCWPW2Q504Y3 356 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 ZNF667Q5HYK9 610 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 DGKKQ5KSL6 1271 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 CEP135Q66GS9 1140 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 TRIM68Q6AZZ1 485 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 SCARA5Q6ZMJ2 495 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 Q6ZS52 159 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 TAF4BQ92750 862 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 B3GNT5Q9BYG0 378 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 SDCBP2Q9H190 292 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 EBF3Q9H4W6 596 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 GKN1Q9NS71 199 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 RBM12Q9NTZ6 932 aaKnown RBP11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 EHD2Q9NZN4 543 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 FRMD4BQ9Y2L6 1034 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 DMXL1Q9Y485 3027 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 OLFM2O95897 454 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 ASS1P00966 412 aaKnown RBP11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 ARSAP15289 507 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 NR2F2P24468 414 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 ASPAP45381 313 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 PDE6CP51160 858 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 SATB1Q01826 763 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 PPP2R5DQ14738 602 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 PDGFRLQ15198 375 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 SGSM1Q2NKQ1 1148 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 CC2D1AQ6P1N0 951 aaPredicted RBP11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 INTS8Q75QN2 995 aaKnown RBP11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 SV2AQ7L0J3 742 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 FAM35AQ86V20 835 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 FMR1NBQ8N0W7 255 aaPredicted RBP11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 SYNPOQ8N3V7 929 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 SPEM1Q8N4L4 309 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 ARL14EPQ8N8R7 260 aaPredicted RBP11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 OSCP1Q8WVF1 389 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 ELMO3Q96BJ8 720 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 TNIP3Q96KP6 325 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 CYP2S1Q96SQ9 504 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 EPC1Q9H2F5 836 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 TRPM5Q9NZQ8 1165 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 ARHGAP26Q9UNA1 814 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 MAPK8IP1Q9UQF2 711 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 GREB1Q4ZG55 1949 aa11.13□□□□□ -0.63
HMGXB3-205ENST00000514469 ATP8B3O60423 1300 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 HELZP42694 1942 aaKnown RBP11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 ZNF840PA6NDX5 716 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 CLDN5O00501 218 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 TRDMT1O14717 391 aaKnown RBP11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 CLSTN1O94985 981 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 OAS1P00973 400 aaKnown RBP11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 HLA-DRAP01903 254 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 TRIM49P0CI25 452 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 TRIM49CP0CI26 452 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 P4HA1P13674 534 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 PIK3CAP42336 1068 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 PPP3CCP48454 512 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 VAMP7P51809 220 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 NRLP54845 237 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 MCCD1P59942 119 aaPredicted RBP11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 EML3Q32P44 896 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 EDRF1Q3B7T1 1238 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 TMEM196Q5HYL7 178 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 PAQR9Q6ZVX9 377 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 FAM186BQ8IYM0 893 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 CPA6Q8N4T0 437 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 SH3RF2Q8TEC5 729 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 ATRIPQ8WXE1 791 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 OVCA2Q8WZ82 227 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 ATP2A3Q93084 1043 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 CCDC34Q96HJ3 373 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 HMGXB4Q9UGU5 601 aa11.12□□□□□ -0.63
HMGXB3-205ENST00000514469 K7ESF4 209 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 TNFRSF10BO14763 440 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 KRT13P13646 458 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 HDCP19113 662 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 RPL13P26373 211 aaKnown RBP11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 GJA4P35212 333 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 CXCL12P48061 93 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 IFNAR2P48551 515 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 NDST1P52848 882 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 NUCB2P80303 420 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 SLC7A9P82251 487 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 ZXDBP98169 803 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 PPP3CAQ08209 521 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 INCA1Q0VD86 236 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 TAF10Q12962 218 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 PNOCQ13519 176 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 COBLL1Q53SF7 1204 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 SPOPLQ6IQ16 392 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 FSTL4Q6MZW2 842 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 UNC93AQ86WB7 457 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 SMYD4Q8IYR2 804 aaPredicted RBP11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 FUKQ8N0W3 1084 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 NUP93Q8N1F7 819 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 KIAA1958Q8N8K9 716 aa11.11□□□□□ -0.63
HMGXB3-205ENST00000514469 ENGASEQ8NFI3 743 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms