RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 POLBP06746 335 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 PDAP1Q13442 181 aaKnown RBP8.05□□□□□ -1.12
CLCN3-209ENST00000513761 RNF220Q5VTB9 566 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 CCDC117Q8IWD4 279 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-209ENST00000513761 PIK3R5Q8WYR1 880 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 TLCD1Q96CP7 247 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 GCNAQ96QF7 691 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 C2orf40Q9H1Z8 148 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 DPPA5A6NC42 116 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 ANKRD63C9JTQ0 380 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 F8VP50 259 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 PFDN6O15212 129 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 GYS1P13807 737 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 PSMC3P17980 439 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 TFE3P19532 575 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-209ENST00000513761 RARRES1P49788 294 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 EFNA5P52803 228 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 ROR2Q01974 943 aaKnown RBP8.05□□□□□ -1.12
CLCN3-209ENST00000513761 TTC27Q6P3X3 843 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 C1orf186Q6ZWK4 172 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 OTOAQ7RTW8 1153 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 CDC26Q8NHZ8 85 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 STAP1Q9ULZ2 295 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 COG5Q9UP83 839 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 SNX13Q9Y5W8 968 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 GLRA3O75311 464 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 PROCP04070 461 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 PDGFRBP09619 1106 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 RAP1GAPP47736 663 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 GLRBP48167 497 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 HDAC4P56524 1084 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 TNFAIP2Q03169 654 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 FAM84AQ96KN4 292 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 WRNIP1Q96S55 665 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 NDUFA13Q9P0J0 144 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 RPS6KL1Q9Y6S9 549 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 ANGPT2O15123 496 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 TGFB1I1O43294 461 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 FAM200BP0CF97 657 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 SULT1E1P49888 294 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 TMTC4Q5T4D3 741 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 ACBD5Q5T8D3 534 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-209ENST00000513761 LLGL2Q6P1M3 1020 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 KRT27Q7Z3Y8 459 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 TMC2Q8TDI7 906 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 FHDC1Q9C0D6 1143 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-209ENST00000513761 PACSIN3Q9UKS6 424 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 PEAK1Q9H792 1746 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 DFFAO00273 331 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 POLD1P28340 1107 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 AVPR1AP37288 418 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 SLC25A3Q00325 362 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 FMO1Q01740 532 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 SLC10A5Q5PT55 438 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 TTC33Q6PID6 262 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-209ENST00000513761 ZNF572Q7Z3I7 529 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-209ENST00000513761 EFCAB3Q8N7B9 438 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 FLAD1Q8NFF5 587 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 GIPC2Q8TF65 315 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 ZNF606Q8WXB4 792 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 CHCHD3Q9NX63 227 aaKnown RBP8.05□□□□□ -1.12
CLCN3-209ENST00000513761 PKD2L2Q9NZM6 624 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 ZNF229Q9UJW7 825 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 USP18Q9UMW8 372 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 FRMPD4Q14CM0 1322 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 PGM3O95394 542 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 RALBP11234 206 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 MYBPC2Q14324 1141 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 INPP5AQ14642 412 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 KBTBD12Q3ZCT8 623 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 RC3H1Q5TC82 1133 aaKnown RBP8.05□□□□□ -1.12
CLCN3-209ENST00000513761 STRIP1Q5VSL9 837 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 BNC2Q6ZN30 1099 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-209ENST00000513761 DACT3Q96B18 629 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-209ENST00000513761 ILKAPQ9H0C8 392 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-209ENST00000513761 ACAD9Q9H845 621 aa8.05□□□□□ -1.12
CLCN3-209ENST00000513761 C2orf71A6NGG8 1288 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 TBC1D12O60347 775 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 MYL6P60660 151 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 ITPRIPL1Q6GPH6 555 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 ELMO2Q96JJ3 720 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 CNDP1Q96KN2 507 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 ZMAT2Q96NC0 199 aaKnown RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 CISHQ9NSE2 258 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 CLIC5Q9NZA1 410 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 TNS2Q63HR2 1409 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 NFIBO00712 420 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 HUS1O60921 280 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 CYP1A2P05177 515 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 TMED10P49755 219 aaKnown RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 HMGCS2P54868 508 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 MARSP56192 900 aaKnown RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 ITGA9Q13797 1035 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 N4BP2L1Q5TBK1 243 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 C16orf46Q6P387 395 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 DIS3LQ8TF46 1054 aaKnown RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 CRAMP1Q96RY5 1269 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 C12orf65Q9H3J6 166 aaKnown RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 SIGLEC1Q9BZZ2 1709 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 WDR46O15213 610 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms