RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 MRPL10Q7Z7H8 261 aaKnown RBP4.54□□□□□ -1.68
ATP2C1-220ENST00000513636 KRT73Q86Y46 540 aa4.54□□□□□ -1.68
ATP2C1-220ENST00000513636 SIK2Q9H0K1 926 aa4.54□□□□□ -1.68
ATP2C1-220ENST00000513636 CAAP1Q9H8G2 361 aa4.54□□□□□ -1.68
ATP2C1-220ENST00000513636 KIF1AQ12756 1690 aa4.54□□□□□ -1.68
ATP2C1-220ENST00000513636 ADGRL3Q9HAR2 1447 aa4.54□□□□□ -1.68
ATP2C1-220ENST00000513636 LTBP4Q8N2S1 1624 aa4.54□□□□□ -1.68
ATP2C1-220ENST00000513636 ABCC11Q96J66 1382 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 NRKQ7Z2Y5 1582 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 CENPJQ9HC77 1338 aaPredicted RBP4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 CYP2D7A0A087X1C5 515 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 SOCS2O14508 198 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 HOXA4Q00056 320 aaPredicted RBP4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 TARDBPQ13148 414 aaKnown RBP eCLIP4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 GTF2H3Q13889 308 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 FLYWCH1Q4VC44 716 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 MIDNQ504T8 468 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 WDR53Q7Z5U6 358 aaPredicted RBP4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 GALNT16Q8N428 558 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 KLHDC4Q8TBB5 520 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 IFI44Q8TCB0 444 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 SCAMP4Q969E2 229 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 C5orf34Q96MH7 638 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 ASB2Q96Q27 587 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 KRTAP2-2Q9BYT5 123 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 SLKQ9H2G2 1235 aaPredicted RBP4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 BRD9Q9H8M2 597 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 GNL3LQ9NVN8 582 aaKnown RBP4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 TRNAU1APQ9NX07 287 aaKnown RBP4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 TBX22Q9Y458 520 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 ATP7BP35670 1465 aa4.53□□□□□ -1.68
ATP2C1-220ENST00000513636 PLEKHH1Q9ULM0 1364 aa4.53□□□□□ -1.69
ATP2C1-220ENST00000513636 LRRC7Q96NW7 1537 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 NHLRC4P0CG21 123 aaPredicted RBP4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 HSPA5P11021 654 aaKnown RBP4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 AGXTP21549 392 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 PDE1AP54750 535 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 GYS2P54840 703 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 PSMC1P62191 440 aaKnown RBP4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 STAT4Q14765 748 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 KIAA1161Q6NSJ0 714 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 NAPRTQ6XQN6 538 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 CHAC2Q8WUX2 184 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 REPS1Q96D71 796 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 CLPTM1LQ96KA5 538 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 CNPPD1Q9BV87 410 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 STK26Q9P289 416 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 CCNL1Q9UK58 526 aaPredicted RBP4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 RAD54BQ9Y620 910 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 DCCP43146 1447 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 DISP3Q9P2K9 1392 aa4.52□□□□□ -1.69
ATP2C1-220ENST00000513636 NHSL1Q5SYE7 1610 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 MYO1FO00160 1098 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 SGTAO43765 313 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 VPS4BO75351 444 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 CHEK2O96017 543 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 JUPP14923 745 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 SMARCA1P28370 1054 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 WASP42768 502 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 ZNF134P52741 427 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 CERKLQ49MI3 558 aaPredicted RBP4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 PDSS2Q86YH6 399 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 PSD4Q8NDX1 1056 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 CAMKK2Q96RR4 588 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 NELL2Q99435 816 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 SMOC2Q9H3U7 446 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 CALCOCO1Q9P1Z2 691 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 CFAP97Q9P2B7 532 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 USP54Q70EL1 1684 aa4.51□□□□□ -1.69
ATP2C1-220ENST00000513636 WDR17Q8IZU2 1322 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 ZNF335Q9H4Z2 1342 aaPredicted RBP4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 ABCA3Q99758 1704 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 TRPM3Q9HCF6 1732 aaPredicted RBP4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 MARF1Q9Y4F3 1742 aaKnown RBP4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 ANKARQ7Z5J8 1434 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 NCOA3Q9Y6Q9 1424 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 CCDC187A0A096LP49 1063 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 ZNF785A8K8V0 405 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 H0YIZ8 118 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 PPM1DO15297 605 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 TLR5O60602 858 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 FGBP02675 491 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 TMEM191BP0C7N4 346 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 DAZAP2Q15038 168 aaPredicted RBP4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 CCDC93Q567U6 631 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 TAF2Q6P1X5 1199 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 CHSY1Q86X52 802 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 LRRC71Q8N4P6 559 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 SMRP1Q8NCR6 262 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 PRAM1Q96QH2 718 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 TESK2Q96S53 571 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 ZNF112Q9UJU3 913 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 AFG3L2Q9Y4W6 797 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 ROBO1Q9Y6N7 1651 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 TMEM94Q12767 1356 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 CCDC7Q96M83 1385 aa4.5□□□□□ -1.69
ATP2C1-220ENST00000513636 IQSEC2Q5JU85 1478 aa4.49□□□□□ -1.69
ATP2C1-220ENST00000513636 PIK3C2AO00443 1686 aa4.49□□□□□ -1.69
ATP2C1-220ENST00000513636 ALS2Q96Q42 1657 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms