RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 KIFC3Q9BVG8 833 aa8.47□□□□□ -1.05
DDR1-273ENST00000513514 MAK16Q9BXY0 300 aaKnown RBP8.47□□□□□ -1.05
DDR1-273ENST00000513514 ARHGAP39Q9C0H5 1083 aa8.47□□□□□ -1.05
DDR1-273ENST00000513514 FZD8Q9H461 694 aa8.47□□□□□ -1.05
DDR1-273ENST00000513514 CXorf56Q9H5V9 222 aa8.47□□□□□ -1.05
DDR1-273ENST00000513514 PRMT7Q9NVM4 692 aaPredicted RBP8.47□□□□□ -1.05
DDR1-273ENST00000513514 BAIAP2L1Q9UHR4 511 aa8.47□□□□□ -1.05
DDR1-273ENST00000513514 DNPEPQ9ULA0 475 aa8.47□□□□□ -1.05
DDR1-273ENST00000513514 PHTF1Q9UMS5 762 aa8.47□□□□□ -1.05
DDR1-273ENST00000513514 TNFSF13BQ9Y275 285 aa8.47□□□□□ -1.05
DDR1-273ENST00000513514 R3HDM2Q9Y2K5 976 aaKnown RBP8.47□□□□□ -1.05
DDR1-273ENST00000513514 C15orf41Q9Y2V0 281 aa8.47□□□□□ -1.05
DDR1-273ENST00000513514 DERAQ9Y315 318 aa8.47□□□□□ -1.05
DDR1-273ENST00000513514 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.47□□□□□ -1.05
DDR1-273ENST00000513514 IVNS1ABPQ9Y6Y0 642 aa8.47□□□□□ -1.05
DDR1-273ENST00000513514 SMCHD1A6NHR9 2005 aa8.47□□□□□ -1.05
DDR1-273ENST00000513514 PHIPQ8WWQ0 1821 aa8.47□□□□□ -1.05
DDR1-273ENST00000513514 C3orf70A6NLC5 250 aaPredicted RBP8.46□□□□□ -1.06
DDR1-273ENST00000513514 SGK1O00141 431 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 HBP1O60381 514 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 FARP2O94887 1054 aaPredicted RBP8.46□□□□□ -1.06
DDR1-273ENST00000513514 HOXC6P09630 235 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 MCF2P10911 925 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 CA4P22748 312 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 KDELR1P24390 212 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 PTPN4P29074 926 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 SSR1P43307 286 aaKnown RBP8.46□□□□□ -1.06
DDR1-273ENST00000513514 NR2C2P49116 596 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 SERPINB9P50453 376 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 ALDH5A1P51649 535 aaPredicted RBP8.46□□□□□ -1.06
DDR1-273ENST00000513514 WDR4P57081 412 aaKnown RBP8.46□□□□□ -1.06
DDR1-273ENST00000513514 SARNPP82979 210 aaKnown RBP8.46□□□□□ -1.06
DDR1-273ENST00000513514 PLCB3Q01970 1234 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 SP3Q02447 781 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 SLC25A11Q02978 314 aaKnown RBP8.46□□□□□ -1.06
DDR1-273ENST00000513514 MKRN4PQ13434 485 aaPredicted RBP8.46□□□□□ -1.06
DDR1-273ENST00000513514 NAB1Q13506 487 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 CAPSQ13938 189 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 TMED2Q15363 201 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 ZNF699Q32M78 642 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 ZNF667Q5HYK9 610 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 TMEM63BQ5T3F8 832 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 ZFYVE27Q5T4F4 411 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 GPAT2Q6NUI2 795 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 TLDC1Q6P9B6 456 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 TBC1D1Q86TI0 1168 aaPredicted RBP8.46□□□□□ -1.06
DDR1-273ENST00000513514 PSTKQ8IV42 348 aaKnown RBP8.46□□□□□ -1.06
DDR1-273ENST00000513514 PALM2Q8IXS6 379 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 FITM2Q8N6M3 262 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 ENDOVQ8N8Q3 282 aaKnown RBP8.46□□□□□ -1.06
DDR1-273ENST00000513514 ANKRD42Q8N9B4 389 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 ASAP3Q8TDY4 903 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 CNKSR2Q8WXI2 1034 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 ATG4AQ8WYN0 398 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 MCRS1Q96EZ8 462 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 MCEEQ96PE7 176 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 FERMT1Q9BQL6 677 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 CNPY3Q9BT09 278 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 TARS2Q9BW92 718 aaKnown RBP8.46□□□□□ -1.06
DDR1-273ENST00000513514 HEMGNQ9BXL5 484 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 TRIM55Q9BYV6 548 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 PRO3102Q9H379 93 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 SMARCAD1Q9H4L7 1026 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 STN1Q9H668 368 aaKnown RBP8.46□□□□□ -1.06
DDR1-273ENST00000513514 DCLRE1BQ9H816 532 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 VPS37BQ9H9H4 285 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 PTPRHQ9HD43 1115 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 ACP6Q9NPH0 428 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 ABCF3Q9NUQ8 709 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.46□□□□□ -1.06
DDR1-273ENST00000513514 DNAJB4Q9UDY4 337 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 RABGEF1Q9UJ41 708 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 C2CD2Q9Y426 696 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 AFG3L2Q9Y4W6 797 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 RIPK3Q9Y572 518 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 COL1A2P08123 1366 aa8.46□□□□□ -1.06
DDR1-273ENST00000513514 WDR81Q562E7 1941 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 BCLAF3A2AJT9 711 aaKnown RBP8.45□□□□□ -1.06
DDR1-273ENST00000513514 LRRD1A4D1F6 860 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 UNCXA6NJT0 531 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 SPDYE16A6NNV3 312 aaPredicted RBP8.45□□□□□ -1.06
DDR1-273ENST00000513514 A8MXQ7 604 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 DPYSL4O14531 572 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 IRF6O14896 467 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 CSDE1O75534 798 aaKnown RBP8.45□□□□□ -1.06
DDR1-273ENST00000513514 KRT37O76014 449 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 PRKCBP05771 671 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 FAM163BP0C2L3 166 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 DHRS4L1P0CG22 281 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 CYP2C8P10632 490 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 ATF7P17544 494 aaPredicted RBP8.45□□□□□ -1.06
DDR1-273ENST00000513514 CD58P19256 250 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 ATP4AP20648 1035 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 CALB2P22676 271 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 PSMA2P25787 234 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 GCAP28676 217 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 ZNF143P52747 638 aaPredicted RBP8.45□□□□□ -1.06
DDR1-273ENST00000513514 SLC18A2Q05940 514 aa8.45□□□□□ -1.06
DDR1-273ENST00000513514 PDIA2Q13087 525 aaKnown RBP8.45□□□□□ -1.06
DDR1-273ENST00000513514 WDR72Q3MJ13 1102 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms