RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 RFXAPO00287 272 aa13.24□□□□□ -0.29
PDPN-210ENST00000513143 TULP2O00295 520 aa13.24□□□□□ -0.29
PDPN-210ENST00000513143 CSPG5O95196 566 aa13.24□□□□□ -0.29
PDPN-210ENST00000513143 KLRC2P26717 231 aa13.24□□□□□ -0.29
PDPN-210ENST00000513143 PLA2G4AP47712 749 aa13.24□□□□□ -0.29
PDPN-210ENST00000513143 RPL34P49207 117 aaKnown RBP13.24□□□□□ -0.29
PDPN-210ENST00000513143 MAP3K7CLP57077 242 aa13.24□□□□□ -0.29
PDPN-210ENST00000513143 DUSP4Q13115 394 aa13.24□□□□□ -0.29
PDPN-210ENST00000513143 HS1BP3Q53T59 392 aa13.24□□□□□ -0.29
PDPN-210ENST00000513143 CCDC122Q5T0U0 273 aa13.24□□□□□ -0.29
PDPN-210ENST00000513143 C10orf76Q5T2E6 689 aa13.24□□□□□ -0.29
PDPN-210ENST00000513143 PHF13Q86YI8 300 aaPredicted RBP13.24□□□□□ -0.29
PDPN-210ENST00000513143 MRPL38Q96DV4 380 aaKnown RBP13.24□□□□□ -0.29
PDPN-210ENST00000513143 HSFY1Q96LI6 401 aa13.24□□□□□ -0.29
PDPN-210ENST00000513143 KCNK16Q96T55 309 aa13.24□□□□□ -0.29
PDPN-210ENST00000513143 PNPLA8Q9NP80 782 aa13.24□□□□□ -0.29
PDPN-210ENST00000513143 DMAP1Q9NPF5 467 aaPredicted RBP13.24□□□□□ -0.29
PDPN-210ENST00000513143 CYLDQ9NQC7 956 aa13.24□□□□□ -0.29
PDPN-210ENST00000513143 TMCO5BA8MYB1 307 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 HHLA1C9JL84 531 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 F8VP50 259 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 TRIM66O15016 1216 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 TGM5O43548 720 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 CLASP2O75122 1294 aaKnown RBP13.23□□□□□ -0.29
PDPN-210ENST00000513143 SEC24AO95486 1093 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 FTLP02792 175 aaPredicted RBP13.23□□□□□ -0.29
PDPN-210ENST00000513143 MMP8P22894 467 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 GRIK1P39086 918 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 NSFP46459 744 aaKnown RBP13.23□□□□□ -0.29
PDPN-210ENST00000513143 TUFMP49411 452 aaKnown RBP13.23□□□□□ -0.29
PDPN-210ENST00000513143 CLCN4P51793 760 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 PDCLQ13371 301 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 SPA17Q15506 151 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 PTPROQ16827 1216 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 PMF1Q6P1K2 205 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 MON1BQ7L1V2 547 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 PIGZQ86VD9 579 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 TCEAL8Q8IYN2 117 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 TTC9BQ8N6N2 239 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 KCTD13Q8WZ19 329 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 C8orf48Q96LL4 319 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 NOX5Q96PH1 765 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 CPXM1Q96SM3 734 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 SLC4A5Q9BY07 1137 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 TTYH1Q9H313 450 aaPredicted RBP13.23□□□□□ -0.29
PDPN-210ENST00000513143 SLC27A5Q9Y2P5 690 aa13.23□□□□□ -0.29
PDPN-210ENST00000513143 REXO2Q9Y3B8 237 aaKnown RBP13.23□□□□□ -0.29
PDPN-210ENST00000513143 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.23□□□□□ -0.29
PDPN-210ENST00000513143 ZNF638Q14966 1978 aaKnown RBP13.23□□□□□ -0.29
PDPN-210ENST00000513143 CDH23Q9H251 3354 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 SOX1O00570 391 aaPredicted RBP13.22□□□□□ -0.29
PDPN-210ENST00000513143 IPO7O95373 1038 aaKnown RBP13.22□□□□□ -0.29
PDPN-210ENST00000513143 GLUD1P00367 558 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 ELF1P32519 619 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 DEKP35659 375 aaKnown RBP13.22□□□□□ -0.29
PDPN-210ENST00000513143 ACADSBP45954 432 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 GABRB2P47870 512 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 RPL10AP62906 217 aaKnown RBP13.22□□□□□ -0.29
PDPN-210ENST00000513143 KRT83P78385 493 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 PTP4A2Q12974 167 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 MGAT5BQ3V5L5 792 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 PTPN20Q4JDL3 420 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 RAB41Q5JT25 222 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 TOGARAM2Q6ZUX3 1019 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 TMEM110Q86TL2 294 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 ERICH1Q86X53 443 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 SCN4BQ8IWT1 228 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 MCOLN2Q8IZK6 566 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 ACRBPQ8NEB7 543 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 SLC22A17Q8WUG5 538 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 VCPIP1Q96JH7 1222 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 PPP1R13BQ96KQ4 1090 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 SPATA17Q96L03 361 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 CEP295NLQ96MC4 621 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 SEPT5Q99719 369 aaPredicted RBP13.22□□□□□ -0.29
PDPN-210ENST00000513143 CYP4F11Q9HBI6 524 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 FBXW11Q9UKB1 542 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 PCDHA13Q9Y5I0 950 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 ADGRG1Q9Y653 693 aa13.22□□□□□ -0.29
PDPN-210ENST00000513143 ANKRD62A6NC57 917 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 TNFRSF10BO14763 440 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 SOAT2O75908 522 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 CALB1P05937 261 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 H2AFZP0C0S5 128 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 MAGEA1P43355 309 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 GPR15P49685 360 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 RGS7P49802 495 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 GALCP54803 685 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 SNX16P57768 344 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 DUSP6Q16828 381 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 DDR2Q16832 855 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 H2AFVQ71UI9 128 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 RTL10Q7L3V2 364 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 ADGRD2Q7Z7M1 963 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 DNAAF5Q86Y56 855 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 KREMEN2Q8NCW0 462 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 MSANTD4Q8NCY6 345 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 C18orf8Q96DM3 657 aa13.21□□□□□ -0.29
PDPN-210ENST00000513143 TRIM44Q96DX7 344 aaPredicted RBP13.21□□□□□ -0.29
PDPN-210ENST00000513143 DESI2Q9BSY9 194 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms