RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 GPSM2P81274 684 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CDK16Q00536 496 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 RASSF7Q02833 373 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC25A11Q02978 314 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRKCQQ04759 706 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PTGDRQ13258 359 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 GBX1Q14549 363 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZMYND11Q15326 602 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 MCMDC2Q4G0Z9 681 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CRTC2Q53ET0 693 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRIM61Q5EBN2 209 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 VARS2Q5ST30 1063 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 GKAP1Q5VSY0 366 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CEP128Q6ZU80 1094 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ADGRG6Q86SQ4 1221 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 JAMLQ86YT9 394 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC22A15Q8IZD6 547 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ADGRF2Q8IZF7 708 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 RFFLQ8WZ73 363 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 BUD13Q9BRD0 619 aaKnown RBP eCLIP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 NUF2Q9BZD4 464 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM117AQ9C073 453 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 S1PR5Q9H228 398 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 AGO3Q9H9G7 860 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 MAP3K20Q9NYL2 800 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SIRPGQ9P1W8 387 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CD300AQ9UGN4 299 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CDC14AQ9UNH5 594 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 COLQQ9Y215 455 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SCN3AQ9NY46 2000 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 E9PMD0 336 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 GPAA1O43292 621 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SNX3O60493 162 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 KRT38O76015 456 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 OCM2P0CE71 109 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 OCMP0CE72 109 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CYP11B2P19099 503 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CASP14P31944 242 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 GMPRP36959 345 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 PAFAH1B1P43034 410 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 GUCY1A3Q02108 690 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 FHL1Q13642 323 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CNGA2Q16280 664 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CAMK4Q16566 473 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 EXOSC6Q5RKV6 272 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SH3PXD2AQ5TCZ1 1133 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF771Q7L3S4 317 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CLNKQ7Z7G1 428 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CPLX4Q7Z7G2 160 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SUMF1Q8NBK3 374 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 NSMCE1Q8WV22 266 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 OSCP1Q8WVF1 389 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 APPBP2Q92624 585 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 KAT5Q92993 513 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 GJA10Q969M2 543 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC124Q96CT7 223 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CALML4Q96GE6 196 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 PDLIM5Q96HC4 596 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRICKLE1Q96MT3 831 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 NEK1Q96PY6 1258 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 RNF26Q9BY78 433 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 XPO5Q9HAV4 1204 aaKnown RBP eCLIP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 ABCF3Q9NUQ8 709 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 BCAP29Q9UHQ4 241 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 LNPEPQ9UIQ6 1025 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SYNRGQ9UMZ2 1314 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 MACROD2A1Z1Q3 448 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 GRXCR2A6NFK2 248 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC15A5A6NIM6 579 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 UGT1A9O60656 530 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 COBLO75128 1261 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 TBX10O75333 385 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC192P0DO97 292 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 GHRP10912 638 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 PDHBP11177 359 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRDX5P30044 214 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 COPB2P35606 906 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 MAGEA9P43362 315 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 PGFP49763 221 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CHMP4BP1P59074 171 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 LAMC2Q13753 1193 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 DSC3Q14574 896 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 THOC7Q6I9Y2 204 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SEPT14Q6ZU15 432 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 NUDT18Q6ZVK8 323 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 C16orf62Q7Z3J2 963 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 TDRPQ86YL5 185 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 FMNL3Q8IVF7 1028 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 MFSD4AQ8N468 514 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 GBP7Q8N8V2 638 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPDYE1Q8NFV5 336 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 MAPK15Q8TD08 544 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF512Q96ME7 567 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 NLRP3Q96P20 1036 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 GBP5Q96PP8 586 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 TSG101Q99816 390 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 BAG1Q99933 345 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 ARHGAP9Q9BRR9 750 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 DDX24Q9GZR7 859 aaKnown RBP eCLIP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 UGT1A7Q9HAW7 530 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms