RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 WDR44Q5JSH3 913 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 NUP93Q8N1F7 819 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 CELF5Q8N6W0 485 aaKnown RBP17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 ZMIZ2Q8NF64 920 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 CYFIP2Q96F07 1278 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 SLC22A12Q96S37 553 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 NELL2Q99435 816 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 HNRNPABQ99729 332 aaKnown RBP17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 SMOQ99835 787 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 MED10Q9BTT4 135 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 NT5C1AQ9BXI3 368 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 HEBP1Q9NRV9 189 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 TDP1Q9NUW8 608 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 CTNND2Q9UQB3 1225 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 MTF2Q9Y483 593 aaPredicted RBP17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 ZNF840PA6NDX5 716 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 GALR2O43603 387 aaPredicted RBP17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 BEST1O76090 585 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 CD72P21854 359 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 FMO5P49326 533 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 MLLT6P55198 1093 aaPredicted RBP17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 MARSP56192 900 aaKnown RBP17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 TAF10Q12962 218 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 FZD5Q13467 585 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 YAF2Q8IY57 180 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 LMO3Q8TAP4 145 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 SLC2A14Q8TDB8 520 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 BPIFB1Q8TDL5 484 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 FOXQ1Q9C009 403 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 CSNK1G1Q9HCP0 422 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 EHD2Q9NZN4 543 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 DLGAP2Q9P1A6 1054 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 CHORDC1Q9UHD1 332 aaPredicted RBP17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 CCL26Q9Y258 94 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 WDFY4Q6ZS81 3184 aa17.13■□□□□ 0.33
PDLIM5-216ENST00000511767 FAM170BA6NMN3 283 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 AP1G2O75843 785 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 GNA14O95837 355 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 CCDC130P13994 396 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 GLULP15104 373 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 HDCP19113 662 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 CD58P19256 250 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 AVPR1AP37288 418 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 PPP3CCP48454 512 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 ZNF268Q14587 947 aaPredicted RBP17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 ARHGAP29Q52LW3 1261 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 FAM35AQ86V20 835 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 TRIM59Q8IWR1 403 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 ZNF687Q8N1G0 1237 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 TTC39CQ8N584 583 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 MLKLQ8NB16 471 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 SCAMP5Q8TAC9 235 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 SMARCD1Q96GM5 515 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 ZFYVE19Q96K21 471 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 FAM83CQ9BQN1 747 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 OSBPL6Q9BZF3 934 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 FAM124BQ9H5Z6 455 aaPredicted RBP17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 GKN1Q9NS71 199 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 CISHQ9NSE2 258 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 COMMD8Q9NX08 183 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 TRPM5Q9NZQ8 1165 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 RWDD2AQ9UIY3 292 aa17.12■□□□□ 0.33
PDLIM5-216ENST00000511767 GREB1Q4ZG55 1949 aa17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 DENND4CQ5VZ89 1909 aa17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 C2orf78A6NCI8 922 aa17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 DCNP07585 359 aaKnown RBP17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 YWHAQP27348 245 aa17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 RAD23BP54727 409 aa17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 IRF2BP1Q8IU81 584 aa17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 ARL14EPQ8N8R7 260 aaPredicted RBP17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 DTWD2Q8NBA8 298 aa17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 SLC4A11Q8NBS3 891 aa17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 EHBP1Q8NDI1 1231 aa17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 HEXIM2Q96MH2 286 aaKnown RBP17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 ARID3AQ99856 593 aa17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 RNF38Q9H0F5 515 aa17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 ATP8B3O60423 1300 aa17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 PTPRDP23468 1912 aa17.11■□□□□ 0.33
PDLIM5-216ENST00000511767 TRAV19A0A0A6YYK7 116 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 FAM92AA1XBS5 289 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 MAN2B1O00754 1011 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 P4HA2O15460 535 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 RTN3O95197 1032 aaPredicted RBP17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 FGFR1OPO95684 399 aaKnown RBP17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 USP17L7P0C7H9 530 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 PFKLP17858 780 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 KCNH2Q12809 1159 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 ZNF394Q53GI3 561 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 SNX30Q5VWJ9 437 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 ZNF852Q6ZMS4 543 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 TPRG1Q6ZUI0 275 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 CCDC105Q8IYK2 499 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 PJA1Q8NG27 643 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 RIN3Q8TB24 985 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 CLDN23Q96B33 292 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 TMEM176AQ96HP8 235 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 TRPC7Q9HCX4 862 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 LTB4R2Q9NPC1 389 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 DMAP1Q9NPF5 467 aaPredicted RBP17.1■□□□□ 0.33
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