RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 HESX1Q9UBX0 185 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 SERTAD3Q9UJW9 196 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 TPCN1Q9ULQ1 816 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 SHOC2Q9UQ13 582 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 TMX2Q9Y320 296 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 PLEKHM1Q9Y4G2 1056 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 PLEKHD1A6NEE1 506 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 MANSC4A6NHS7 340 aaPredicted RBP3.89□□□□□ -1.79
CHD1-207ENST00000511628 RHPN2P1A8MT19 583 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 RASA4BC9J798 803 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 SLC16A3O15427 465 aaKnown RBP3.89□□□□□ -1.79
CHD1-207ENST00000511628 RASA4O43374 803 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 MGEA5O60502 916 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 HNRNPCP07910 306 aaKnown RBP eCLIP3.89□□□□□ -1.79
CHD1-207ENST00000511628 PDHA1P08559 390 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 ZKSCAN1P17029 563 aaPredicted RBP3.89□□□□□ -1.79
CHD1-207ENST00000511628 WT1P19544 449 aaPredicted RBP3.89□□□□□ -1.79
CHD1-207ENST00000511628 ARFIP2P53365 341 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 SUMO3P55854 103 aaPredicted RBP3.89□□□□□ -1.79
CHD1-207ENST00000511628 LILRA4P59901 499 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 FMO1Q01740 532 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 NHLH1Q02575 133 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 GRM1Q13255 1194 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 E2F2Q14209 437 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 SRSF7Q16629 238 aaKnown RBP eCLIP3.89□□□□□ -1.79
CHD1-207ENST00000511628 FCRLBQ6BAA4 426 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 TMPRSS9Q7Z410 1059 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 ZNF804AQ7Z570 1209 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 LIX1LQ8IVB5 337 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 FAM186BQ8IYM0 893 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.89□□□□□ -1.79
CHD1-207ENST00000511628 VPS37AQ8NEZ2 397 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 HASPINQ8TF76 798 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 NTN5Q8WTR8 489 aaPredicted RBP3.89□□□□□ -1.79
CHD1-207ENST00000511628 RIPOR3Q96MK2 946 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 TRIM54Q9BYV2 358 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 LRRC27Q9C0I9 530 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 BTBD1Q9H0C5 482 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 GLOD4Q9HC38 313 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 ALG13Q9NP73 1137 aaKnown RBP3.89□□□□□ -1.79
CHD1-207ENST00000511628 PIH1D1Q9NWS0 290 aaKnown RBP3.89□□□□□ -1.79
CHD1-207ENST00000511628 DKK3Q9UBP4 350 aa3.89□□□□□ -1.79
CHD1-207ENST00000511628 VWC2LB2RUY7 222 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 C1QL1O75973 258 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 XRCC6P12956 609 aaKnown RBP eCLIP3.88□□□□□ -1.79
CHD1-207ENST00000511628 BRAFP15056 766 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 TSHRP16473 764 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 CYP2C18P33260 490 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 CLCN2P51788 898 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 ZNF543Q08ER8 600 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 CNGA2Q16280 664 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 C3orf38Q5JPI3 329 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 PCID2Q5JVF3 399 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 TREML2Q5T2D2 321 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 KIAA1614Q5VZ46 1190 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 RGS7BPQ6MZT1 257 aaPredicted RBP3.88□□□□□ -1.79
CHD1-207ENST00000511628 CEP85Q6P2H3 762 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 C11orf96Q7Z7L8 435 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 MPP5Q8N3R9 675 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 OR2C3Q8N628 320 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 XAGE5Q8WWM1 108 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 RFKQ969G6 155 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 KIAA1191Q96A73 305 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 TNIP3Q96KP6 325 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 CCDC138Q96M89 665 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 PTDSS2Q9BVG9 487 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 DPCDQ9BVM2 203 aaPredicted RBP3.88□□□□□ -1.79
CHD1-207ENST00000511628 SMURF2Q9HAU4 748 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 COL20A1Q9P218 1284 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 FRMD4BQ9Y2L6 1034 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.88□□□□□ -1.79
CHD1-207ENST00000511628 SNX13Q9Y5W8 968 aa3.88□□□□□ -1.79
CHD1-207ENST00000511628 ABHD14A-ACY1A0A1B0GW23 586 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 POM121BA6NF01 834 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 SMIM22K7EJ46 135 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 TBC1D4O60343 1298 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 RBMXL2O75526 392 aaKnown RBP3.87□□□□□ -1.79
CHD1-207ENST00000511628 DNAJB5O75953 348 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 ONECUT2O95948 504 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 PRKCGP05129 697 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 THP07101 528 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 ELFN1P0C7U0 828 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 EN2P19622 333 aaPredicted RBP3.87□□□□□ -1.79
CHD1-207ENST00000511628 DRD4P21917 467 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 TNFSF4P23510 183 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 PPIFP30405 207 aaKnown RBP3.87□□□□□ -1.79
CHD1-207ENST00000511628 LRPAP1P30533 357 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 ZNF134P52741 427 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 PRKAG1P54619 331 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 EEFSECP57772 596 aaKnown RBP3.87□□□□□ -1.79
CHD1-207ENST00000511628 HTRA4P83105 476 aaPredicted RBP3.87□□□□□ -1.79
CHD1-207ENST00000511628 SLC10A2Q12908 348 aaPredicted RBP3.87□□□□□ -1.79
CHD1-207ENST00000511628 IFIT5Q13325 482 aaKnown RBP3.87□□□□□ -1.79
CHD1-207ENST00000511628 EZH2Q15910 746 aaKnown RBP3.87□□□□□ -1.79
CHD1-207ENST00000511628 SLC44A4Q53GD3 710 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 FAM83BQ5T0W9 1011 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 EMC10Q5UCC4 262 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 KLHDC7AQ5VTJ3 777 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 LMBRD2Q68DH5 695 aaPredicted RBP3.87□□□□□ -1.79
CHD1-207ENST00000511628 ERAP2Q6P179 960 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms