RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	SLC6A11	P48066	632 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	DMP1	Q13316	513 aa	Predicted RBP	11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	CCDC157	Q569K6	752 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	BROX	Q5VW32	411 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	NCAPH2	Q6IBW4	605 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	DHX32	Q7L7V1	743 aa	Known RBP	11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	CADM4	Q8NFZ8	388 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	SH3RF2	Q8TEC5	729 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	PSMG3-AS1	Q96PY0	264 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	NACC1	Q96RE7	527 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	CYP2S1	Q96SQ9	504 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	FAM117A	Q9C073	453 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	ZCWPW1	Q9H0M4	648 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	ZDHHC4	Q9NPG8	344 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	TUBGCP4	Q9UGJ1	667 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	PCDHA4	Q9UN74	947 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	ARHGAP26	Q9UNA1	814 aa		11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.64	□□□□□ -0.55
PTCD2-208	ENST00000510676	STK36	Q9NRP7	1315 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	TRAV19	A0A0A6YYK7	116 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	KLF18	A0A0U1RQI7	1052 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	TRIM66	O15016	1216 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	USO1	O60763	962 aa	Known RBP	11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	NDUFS2	O75306	463 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	CKM	P06732	381 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	HAPLN1	P10915	354 aa	Predicted RBP	11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	KRT10	P13645	584 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	GSPT1	P15170	499 aa	Known RBP	11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	CLDN6	P56747	220 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	VAC14	Q08AM6	782 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	SMARCB1	Q12824	385 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	NPY5R	Q15761	445 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	SLC39A12	Q504Y0	691 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	FBXL19	Q6PCT2	694 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	ATG14	Q6ZNE5	492 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	USP49	Q70CQ1	688 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	C12orf40	Q86WS4	652 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	ADGRG2	Q8IZP9	1017 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	TSC1	Q92574	1164 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	TRMT2B	Q96GJ1	504 aa	Known RBP	11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	MYRFL	Q96LU7	910 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	RNF26	Q9BY78	433 aa	Predicted RBP	11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	ARHGEF4	Q9NR80	690 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	HSPBP1	Q9NZL4	362 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	HCN2	Q9UL51	889 aa		11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.63	□□□□□ -0.55
PTCD2-208	ENST00000510676	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	ABLIM1	O14639	778 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	SUV39H1	O43463	412 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	HOXB2	P14652	356 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	GCFC2	P16383	781 aa	Known RBP	11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	PROZ	P22891	400 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	CD6	P30203	668 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	PCBP4	P57723	403 aa	Known RBP	11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	OSTN	P61366	133 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	ZXDB	P98169	803 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	DHCR24	Q15392	516 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	SF3A1	Q15459	793 aa	Known RBP	11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	NTRK3	Q16288	839 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	HES3	Q5TGS1	186 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	MAEA	Q7L5Y9	396 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	METTL3	Q86U44	580 aa	Known RBP	11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	DEPTOR	Q8TB45	409 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	SPPL2B	Q8TCT7	592 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	PIGO	Q8TEQ8	1089 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	LRRC15	Q8TF66	581 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	CCDC43	Q96MW1	224 aa	Known RBP	11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	ACO2	Q99798	780 aa	Known RBP	11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	CD93	Q9NPY3	652 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	STARD5	Q9NSY2	213 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	FTSJ1	Q9UET6	329 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	SRPK3	Q9UPE1	567 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	STARD13	Q9Y3M8	1113 aa		11.62	□□□□□ -0.55
PTCD2-208	ENST00000510676	FBN3	Q75N90	2809 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	CIT	O14578	2027 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	MEI4	A8MW99	385 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	RFPL3	O75679	317 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	NOL4	O94818	638 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	CYP11A1	P05108	521 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	CSH1	P0DML2	217 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	CSH2	P0DML3	217 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	MCF2	P10911	925 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	LIG1	P18858	919 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	CYP3A5	P20815	502 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	NTSR1	P30989	418 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	NLRP5	P59047	1200 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	NFATC3	Q12968	1075 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	REST	Q13127	1097 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	PPP2R5A	Q15172	486 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	NECTIN1	Q15223	517 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	ZBTB6	Q15916	424 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	INF2	Q27J81	1249 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	KIF19	Q2TAC6	998 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	SLC10A6	Q3KNW5	377 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	INAVA	Q3KP66	663 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	ZNF568	Q3ZCX4	644 aa		11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	LCE2D	Q5TA82	110 aa	Predicted RBP	11.61	□□□□□ -0.55
PTCD2-208	ENST00000510676	CREB3L3	Q68CJ9	461 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms