RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 DMPKQ09013 629 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 MTMR1Q13613 665 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 MDH1BQ5I0G3 518 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 RNF219Q5W0B1 726 aaPredicted RBP8.67□□□□□ -1.02
HTT-208ENST00000510626 CYP4Z2PQ8N1L4 340 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 AKAP7Q9P0M2 348 aaPredicted RBP8.67□□□□□ -1.02
HTT-208ENST00000510626 PREX2Q70Z35 1606 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 PI4K2BG5E9Z4 385 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 CRKP46108 304 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 GTF2IP78347 998 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 CNTN1Q12860 1018 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 STRA8Q7Z7C7 330 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 KIAA1257Q9ULG3 409 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 HPCAP84074 193 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 TSTA3Q13630 321 aaPredicted RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 ZNF394Q53GI3 561 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 PHF20Q9BVI0 1012 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 DCLK3Q9C098 648 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 USP6P35125 1406 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 SYNJ2BP-COX16A0A087WUM0 186 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 MPOP05164 745 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 OGNP20774 298 aaKnown RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 ENGASEQ8NFI3 743 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 RORBQ92753 470 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 TBCBQ99426 244 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 GDF3Q9NR23 364 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 COX16Q9P0S2 106 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 OVOS2A0A0G2JMS6 1433 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 EMSYQ7Z589 1322 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 GSAPA4D1B5 854 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 NFX1Q12986 1120 aaKnown RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 ZNF554Q86TJ5 538 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 EXOC3L1Q86VI1 746 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 RAB6BQ9NRW1 208 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.66□□□□□ -1.02
HTT-208ENST00000510626 PNPLA6Q8IY17 1366 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 RGS20O76081 388 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 UNC5CO95185 931 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 NNMTP40261 264 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 KCNA1Q09470 495 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 KCNMA1Q12791 1236 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 EIF2B5Q13144 721 aaKnown RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 REXO1L1PQ8IX06 675 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 EID3Q8N140 333 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 ZKSCAN4Q969J2 545 aaPredicted RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 MLH1P40692 756 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 THOC7Q6I9Y2 204 aaKnown RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 AAGABQ6PD74 315 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 ARCQ7LC44 396 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 DNAJB7Q7Z6W7 309 aaPredicted RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 BORCS5Q969J3 196 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 OMA1Q96E52 524 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 MAGEB10Q96LZ2 347 aaPredicted RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 PIGUQ9H490 435 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 DNAJB5O75953 348 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 NCOA4Q13772 614 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 HABP4Q5JVS0 413 aaKnown RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 FAM92BQ6ZTR7 304 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 NLGN1Q8N2Q7 840 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 SFRP1Q8N474 314 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 HES6Q96HZ4 224 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 EIF2AK1Q9BQI3 630 aaKnown RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 MCM8Q9UJA3 840 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 ANKRD65E5RJM6 399 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 PARP6Q2NL67 630 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 RASGRP4Q8TDF6 673 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 HBS1LQ9Y450 684 aaKnown RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 ABHD2P08910 425 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 COMTP21964 271 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 NUDT2P50583 147 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 BCAP31P51572 246 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 ELF3P78545 371 aaPredicted RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 ALDH16A1Q8IZ83 802 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 NUP93Q8N1F7 819 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 PCDH9Q9HC56 1237 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 DYRK4Q9NR20 520 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 VPS45Q9NRW7 570 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 BTBD3Q9Y2F9 522 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 AAR2Q9Y312 384 aaKnown RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 SYCE2Q6PIF2 218 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 LEMD2Q8NC56 503 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 ZNF185O15231 689 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 EXTL3O43909 919 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 ZNF862O60290 1169 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 RFC5P40937 340 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 SEC24CP53992 1094 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 RBP5P82980 135 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 USP10Q14694 798 aaKnown RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 FAM102AQ5T9C2 384 aaPredicted RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 USP17L2Q6R6M4 530 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 RAD9BQ6WBX8 426 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 FUKQ8N0W3 1084 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 TCF7L2Q9NQB0 619 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 PCDHGA3Q9Y5H0 932 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 CD4P01730 458 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 TRIM28Q13263 835 aaKnown RBP8.66□□□□□ -1.02
HTT-208ENST00000510626 KBTBD8Q8NFY9 601 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 CAMKK2Q96RR4 588 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 CPNE1Q99829 537 aa8.66□□□□□ -1.02
HTT-208ENST00000510626 ACAD9Q9H845 621 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms