RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 TBXAS1P24557 533 aaPredicted RBP12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 ANXA13P27216 316 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 ZNF394Q53GI3 561 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 ARHGAP17Q68EM7 881 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 PHLDB3Q6NSJ2 640 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 GPIHBP1Q8IV16 184 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 NUP93Q8N1F7 819 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 MAB21L3Q8N8X9 362 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 ENOX1Q8TC92 643 aaKnown RBP12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 DEPDC1BQ8WUY9 529 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 DDX23Q9BUQ8 820 aaKnown RBP12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 TRMT61BQ9BVS5 477 aaKnown RBP12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 SLITRK6Q9H5Y7 841 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 DMAP1Q9NPF5 467 aaPredicted RBP12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 COMMD8Q9NX08 183 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 TMEM63CQ9P1W3 806 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 DACH1Q9UI36 760 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 CNTN6Q9UQ52 1028 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 ATP8B3O60423 1300 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 RNF225M0QZC1 329 aaPredicted RBP12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 CLSTN1O94985 981 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 OLFM2O95897 454 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 ZDHHC11BP0C7U3 371 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 PFKLP17858 780 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 PPP3CCP48454 512 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 STARD6P59095 220 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 PFKPQ01813 784 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 GCNT1Q02742 428 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 CETN1Q12798 172 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 LRMPQ12912 555 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 TAF10Q12962 218 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 GRM2Q14416 872 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 ZNF268Q14587 947 aaPredicted RBP12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 SLC44A4Q53GD3 710 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 MIIPQ5JXC2 388 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 CCDC183Q5T5S1 534 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 PPP1R26Q5T8A7 1209 aaPredicted RBP12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 SNX30Q5VWJ9 437 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 DPY19L2P1Q6NXN4 242 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 CLEC20AQ6ZU45 233 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 ARHGEF19Q8IW93 802 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 SIX5Q8N196 739 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 CELF5Q8N6W0 485 aaKnown RBP12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 SCAMP5Q8TAC9 235 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 RIN3Q8TB24 985 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 MRPS31Q92665 395 aaKnown RBP12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 KAT5Q92993 513 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 USP13Q92995 863 aaPredicted RBP12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 HEXIM2Q96MH2 286 aaKnown RBP12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 KREMEN1Q96MU8 473 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 NT5C1BQ96P26 610 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 GCNAQ96QF7 691 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 SLC22A12Q96S37 553 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 CYP2S1Q96SQ9 504 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 MED10Q9BTT4 135 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 DUSP16Q9BY84 665 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 UBXN6Q9BZV1 441 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 PNPLA8Q9NP80 782 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 KRT82Q9NSB4 513 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 SAMSN1Q9NSI8 373 aaKnown RBP12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 EHD2Q9NZN4 543 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 ZDBF2Q9HCK1 2354 aa12.45□□□□□ -0.42
HMGXB3-203ENST00000510472 GTPBP10A4D1E9 387 aaKnown RBP12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 C2orf78A6NCI8 922 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 CHADO15335 359 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 RTN3O95197 1032 aaPredicted RBP12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 FAM200BP0CF97 657 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 TCF3P15923 654 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 YWHAQP27348 245 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 ADORA2BP29275 332 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 AVPR2P30518 371 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 CLCN5P51795 746 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 ZNF132P52740 706 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 SLC5A3P53794 718 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 MAP3K7CLP57077 242 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 ZXDBP98169 803 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 CWF19L1Q69YN2 538 aaKnown RBP12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 OVCA2Q8WZ82 227 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 DNASE1L2Q92874 299 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 JAKMIP2Q96AA8 810 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 ZSWIM1Q9BR11 485 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 RNF38Q9H0F5 515 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 INTS2Q9H0H0 1204 aaKnown RBP12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 SMG9Q9H0W8 520 aaKnown RBP12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 ARHGEF3Q9NR81 526 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 TDP1Q9NUW8 608 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 TRPM5Q9NZQ8 1165 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 FBXL21Q9UKT6 434 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 KIAA1257Q9ULG3 409 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 CCL26Q9Y258 94 aa12.44□□□□□ -0.42
HMGXB3-203ENST00000510472 PI15O43692 258 aa12.43□□□□□ -0.42
HMGXB3-203ENST00000510472 OAS1P00973 400 aaKnown RBP12.43□□□□□ -0.42
HMGXB3-203ENST00000510472 PAEPP09466 180 aa12.43□□□□□ -0.42
HMGXB3-203ENST00000510472 TRIM21P19474 475 aaKnown RBP12.43□□□□□ -0.42
HMGXB3-203ENST00000510472 SLC9A1P19634 815 aa12.43□□□□□ -0.42
HMGXB3-203ENST00000510472 PON1P27169 355 aa12.43□□□□□ -0.42
HMGXB3-203ENST00000510472 GDI1P31150 447 aa12.43□□□□□ -0.42
HMGXB3-203ENST00000510472 AVPR1AP37288 418 aa12.43□□□□□ -0.42
HMGXB3-203ENST00000510472 PGFP49763 221 aa12.43□□□□□ -0.42
HMGXB3-203ENST00000510472 VCPP55072 806 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms