RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 AVPR1BP47901 424 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 KCNJ5P48544 419 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 CACNB3P54284 484 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 INHBCP55103 352 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 FPGSQ05932 587 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 TAF2Q6P1X5 1199 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 LCORLQ8N3X6 602 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 SNX19Q92543 992 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 CCDC136Q96JN2 1154 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 SORCS2Q96PQ0 1159 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 IL16Q14005 1332 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 FER1L4A9Z1Z3 1794 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 MYO1FO00160 1098 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 FYB1O15117 783 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 UNC5CO95185 931 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 SRGNP10124 158 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 EN2P19622 333 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 MTHFSP49914 203 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 LLGL1Q15334 1064 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 LAIR1Q6GTX8 287 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 APOA5Q6Q788 366 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 SSH3Q8TE77 659 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 PTCD3Q96EY7 689 aaKnown RBP8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 P2RX7Q99572 595 aaKnown RBP8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 HEPHQ9BQS7 1158 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 SPATA5L1Q9BVQ7 753 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 CYP4F11Q9HBI6 524 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 STK26Q9P289 416 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 HESX1Q9UBX0 185 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 TESQ9UGI8 421 aaKnown RBP8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 MON2Q7Z3U7 1717 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 COL3A1P02461 1466 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 C3P01024 1663 aa8.36□□□□□ -1.07
TRAPPC11-206ENST00000509857 SETD1BQ9UPS6 1966 aaKnown RBP8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 APAF1O14727 1248 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 PROM1O43490 865 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 RHCEP18577 417 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 GATA3P23771 443 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 RHDQ02161 417 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 CD300EQ496F6 205 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 MRGPRGQ86SM5 289 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 PCSK9Q8NBP7 692 aaKnown RBP8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 FAM156AQ8NDB6 213 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 BEND2Q8NDZ0 799 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 FAM46DQ8NEK8 389 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 Q96MF0 132 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 TOR3AQ9H497 397 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 KCTD5Q9NXV2 234 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 EPN1Q9Y6I3 576 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 AKAP12Q02952 1782 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 METP08581 1390 aa8.35□□□□□ -1.07
TRAPPC11-206ENST00000509857 FANCIQ9NVI1 1328 aa8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 GRPP07492 148 aa8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 KITP10721 976 aa8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 VIPR2P41587 438 aa8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 NPTX2P47972 431 aa8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 SEC24CP53992 1094 aa8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 FAM193AP78312 1265 aa8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 IRX6P78412 446 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 BOP1Q14137 746 aaKnown RBP8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 PREPLQ4J6C6 727 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 HECTD2Q5U5R9 776 aa8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 SLC30A10Q6XR72 485 aa8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 OSBPL9Q96SU4 736 aa8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 SMOC2Q9H3U7 446 aa8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 RAD54BQ9Y620 910 aa8.34□□□□□ -1.07
TRAPPC11-206ENST00000509857 CDK12Q9NYV4 1490 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 A0A087WWL8 130 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 CFAP69A5D8W1 941 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 GOLIM4O00461 696 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 MARCH6O60337 910 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 VPS4BO75351 444 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 NDUFV1P49821 464 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 RNF220Q5VTB9 566 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 DARS2Q6PI48 645 aaKnown RBP8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 ZNF783Q6ZMS7 281 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 SUPT20HQ8NEM7 779 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 LRTOMTQ8WZ04 291 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 SUCLG2Q96I99 432 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 TTPALQ9BTX7 342 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 BHMT2Q9H2M3 363 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 MYH16Q9H6N6 1097 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 CASS4Q9NQ75 786 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 DDX21Q9NR30 783 aaKnown RBP eCLIP8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 PACSIN3Q9UKS6 424 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 DMTF1Q9Y222 760 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 RIMS1Q86UR5 1692 aaKnown RBP8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 TOPAZ1Q8N9V7 1692 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 LRRC7Q96NW7 1537 aa8.33□□□□□ -1.08
TRAPPC11-206ENST00000509857 ITSN1Q15811 1721 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 PPIP5K1Q6PFW1 1433 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 ANKARQ7Z5J8 1434 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 ISM1B1AKI9 464 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 TCERG1O14776 1098 aaKnown RBP8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 DCLK1O15075 740 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 TBX3O15119 743 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 ESRRBO95718 433 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms