RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 CPT1AP50416 773 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 CCR5P51681 352 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 CALD1Q05682 793 aaKnown RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 SMAD1Q15797 465 aaKnown RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 WDR72Q3MJ13 1102 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 FAXCQ5TGI0 409 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 LIPIQ6XZB0 460 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 BCL6BQ8N143 479 aaPredicted RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 TCP11L2Q8N4U5 519 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 NGEFQ8N5V2 710 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 PLA2G15Q8NCC3 412 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 PIK3C3Q8NEB9 887 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ZCCHC10Q8TBK6 192 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 IPO4Q8TEX9 1081 aaKnown RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 FNIP1Q8TF40 1166 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 NOC3LQ8WTT2 800 aaKnown RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 C18orf8Q96DM3 657 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 CCDC34Q96HJ3 373 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 FAM84AQ96KN4 292 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ZSWIM3Q96MP5 696 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 REEP2Q9BRK0 252 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 AP1M1Q9BXS5 423 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 MCOLN1Q9GZU1 580 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ALDH8A1Q9H2A2 487 aaPredicted RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 NSUN3Q9H649 340 aaKnown RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 SYNCQ9H7C4 482 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 BARX1Q9HBU1 254 aaPredicted RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 TBC1D14Q9P2M4 693 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 MORF4L1Q9UBU8 362 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 AJAP1Q9UKB5 411 aaPredicted RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ITGB1BP2Q9UKP3 347 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 DERAQ9Y315 318 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 CDK12Q9NYV4 1490 aaPredicted RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 GOLGA6L10A0A0M3HER8 536 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 AQP12BA6NM10 295 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 COQ9O75208 318 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 URI1O94763 535 aaPredicted RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ALDH1A2O94788 518 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 CSPG5O95196 566 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 CD1AP06126 327 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 SNRPA1P09661 255 aaKnown RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 HSPA1AP0DMV8 641 aaKnown RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 HSPA1BP0DMV9 641 aaKnown RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ATF2P15336 505 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 CDH2P19022 906 aaPredicted RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 FBLN1P23142 703 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 RRM1P23921 792 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 CNTFP26441 200 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 GALNSP34059 522 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 KIR2DL3P43628 341 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ANTXR2P58335 489 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 DUSP2Q05923 314 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 SCAPQ12770 1279 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ACVR2BQ13705 512 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ERV3-1Q14264 604 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 MLANAQ16655 118 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 CTXN3Q4LDR2 81 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ZNF648Q5T619 568 aaPredicted RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 TTC22Q5TAA0 569 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 FAM160B1Q5W0V3 765 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 PLAG1Q6DJT9 500 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 MCTP2Q6DN12 878 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 LIN54Q6MZP7 749 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 CCDC129Q6ZRS4 1044 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ZNF365Q70YC5 407 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ADSSL1Q8N142 457 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ZGPATQ8N5A5 531 aaKnown RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 DNAJC5GQ8N7S2 189 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 DCBLD1Q8N8Z6 715 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 DNERQ8NFT8 737 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 CCHCR1Q8TD31 782 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ALG3Q92685 438 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 TTPALQ9BTX7 342 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 PAIP1Q9H074 479 aaKnown RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 SLC6A17Q9H1V8 727 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 SERHL2Q9H4I8 314 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 RETREG1Q9H6L5 497 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ZMYND8Q9ULU4 1186 aaPredicted RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 HS3ST4Q9Y661 456 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 CYP46A1Q9Y6A2 500 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 SIGLEC1Q9BZZ2 1709 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ATRNL1Q5VV63 1379 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 IRS2Q9Y4H2 1338 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 SPHKAPQ2M3C7 1700 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 A0A1W2PPH5 198 aa2.5□□□□□ -2.01
PDE4D-218ENST00000509368 B9A039 149 aa2.5□□□□□ -2.01
PDE4D-218ENST00000509368 H0Y3Z8 333 aa2.5□□□□□ -2.01
PDE4D-218ENST00000509368 CCNT2O60583 730 aaKnown RBP2.5□□□□□ -2.01
PDE4D-218ENST00000509368 TIPRLO75663 272 aa2.5□□□□□ -2.01
PDE4D-218ENST00000509368 LARGE1O95461 756 aa2.5□□□□□ -2.01
PDE4D-218ENST00000509368 GRPP07492 148 aa2.5□□□□□ -2.01
PDE4D-218ENST00000509368 GJB1P08034 283 aa2.5□□□□□ -2.01
PDE4D-218ENST00000509368 ANXA6P08133 673 aa2.5□□□□□ -2.01
PDE4D-218ENST00000509368 ZSCAN22P10073 491 aaPredicted RBP2.5□□□□□ -2.01
PDE4D-218ENST00000509368 NR2F1P10589 423 aa2.5□□□□□ -2.01
PDE4D-218ENST00000509368 CYP2C8P10632 490 aa2.5□□□□□ -2.01
PDE4D-218ENST00000509368 ACADMP11310 421 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms