RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 PRAMEF12O95522 483 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 TCF15Q12870 199 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 PAK1Q13153 545 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 DCAF17Q5H9S7 520 aaPredicted RBP17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 WDR44Q5JSH3 913 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 NUP93Q8N1F7 819 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 CELF5Q8N6W0 485 aaKnown RBP17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 ZMIZ2Q8NF64 920 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 CYFIP2Q96F07 1278 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 SLC22A12Q96S37 553 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 NELL2Q99435 816 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 HNRNPABQ99729 332 aaKnown RBP17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 SMOQ99835 787 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 MED10Q9BTT4 135 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 NT5C1AQ9BXI3 368 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 HEBP1Q9NRV9 189 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 TDP1Q9NUW8 608 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 CTNND2Q9UQB3 1225 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 MTF2Q9Y483 593 aaPredicted RBP17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 ZNF840PA6NDX5 716 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 GALR2O43603 387 aaPredicted RBP17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 BEST1O76090 585 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 CD72P21854 359 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 FMO5P49326 533 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 MLLT6P55198 1093 aaPredicted RBP17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 MARSP56192 900 aaKnown RBP17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 TAF10Q12962 218 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 FZD5Q13467 585 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 YAF2Q8IY57 180 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 LMO3Q8TAP4 145 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 SLC2A14Q8TDB8 520 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 BPIFB1Q8TDL5 484 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 FOXQ1Q9C009 403 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 CSNK1G1Q9HCP0 422 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 EHD2Q9NZN4 543 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 DLGAP2Q9P1A6 1054 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 CHORDC1Q9UHD1 332 aaPredicted RBP17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 CCL26Q9Y258 94 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 WDFY4Q6ZS81 3184 aa17.13■□□□□ 0.33
PDLIM5-212ENST00000509333 FAM170BA6NMN3 283 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 AP1G2O75843 785 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 GNA14O95837 355 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 CCDC130P13994 396 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 GLULP15104 373 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 HDCP19113 662 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 CD58P19256 250 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 AVPR1AP37288 418 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 PPP3CCP48454 512 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 ZNF268Q14587 947 aaPredicted RBP17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 ARHGAP29Q52LW3 1261 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 FAM35AQ86V20 835 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 TRIM59Q8IWR1 403 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 ZNF687Q8N1G0 1237 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 TTC39CQ8N584 583 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 MLKLQ8NB16 471 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 SCAMP5Q8TAC9 235 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 SMARCD1Q96GM5 515 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 ZFYVE19Q96K21 471 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 FAM83CQ9BQN1 747 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 OSBPL6Q9BZF3 934 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 FAM124BQ9H5Z6 455 aaPredicted RBP17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 GKN1Q9NS71 199 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 CISHQ9NSE2 258 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 COMMD8Q9NX08 183 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 TRPM5Q9NZQ8 1165 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 RWDD2AQ9UIY3 292 aa17.12■□□□□ 0.33
PDLIM5-212ENST00000509333 GREB1Q4ZG55 1949 aa17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 DENND4CQ5VZ89 1909 aa17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 C2orf78A6NCI8 922 aa17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 DCNP07585 359 aaKnown RBP17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 YWHAQP27348 245 aa17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 RAD23BP54727 409 aa17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 IRF2BP1Q8IU81 584 aa17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 ARL14EPQ8N8R7 260 aaPredicted RBP17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 DTWD2Q8NBA8 298 aa17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 SLC4A11Q8NBS3 891 aa17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 EHBP1Q8NDI1 1231 aa17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 HEXIM2Q96MH2 286 aaKnown RBP17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 ARID3AQ99856 593 aa17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 RNF38Q9H0F5 515 aa17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 ATP8B3O60423 1300 aa17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 PTPRDP23468 1912 aa17.11■□□□□ 0.33
PDLIM5-212ENST00000509333 TRAV19A0A0A6YYK7 116 aa17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 FAM92AA1XBS5 289 aa17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 MAN2B1O00754 1011 aa17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 P4HA2O15460 535 aa17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 RTN3O95197 1032 aaPredicted RBP17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 FGFR1OPO95684 399 aaKnown RBP17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 USP17L7P0C7H9 530 aa17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 PFKLP17858 780 aa17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 KCNH2Q12809 1159 aa17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 ZNF394Q53GI3 561 aa17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 SNX30Q5VWJ9 437 aa17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 ZNF852Q6ZMS4 543 aa17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 TPRG1Q6ZUI0 275 aa17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 CCDC105Q8IYK2 499 aa17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 PJA1Q8NG27 643 aa17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 RIN3Q8TB24 985 aa17.1■□□□□ 0.33
PDLIM5-212ENST00000509333 CLDN23Q96B33 292 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms