RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 GMEB2Q9UKD1 530 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 ZBTB21Q9ULJ3 1066 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 RAB26Q9ULW5 256 aa11.26□□□□□ -0.61
PDLIM5-210ENST00000508216 MYO5AQ9Y4I1 1855 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 PCDH11YQ9BZA8 1340 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 NPHP3-ACAD11A0A0J9YXS1 232 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 ESYT3A0FGR9 886 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 A8MX80 341 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 UBAP1LF5GYI3 381 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 H0Y858 1186 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 CCDC188H7C350 402 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 ELL2O00472 640 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 MTSS1O43312 755 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 RAD51CO43502 376 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 SNAPINO95295 136 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 THRAP10827 490 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 RPS2P15880 293 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 PON1P27169 355 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 PHKA1P46020 1223 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 PNOCQ13519 176 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 RAPGEF1Q13905 1077 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 SLC15A2Q16348 729 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 PPP2R5EQ16537 467 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 CYP2A13Q16696 494 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 TCHHL1Q5QJ38 904 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 OR7E24Q6IFN5 339 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 RFWD3Q6PCD5 774 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 WDR59Q6PJI9 974 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 TMEM126BQ8IUX1 230 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 FOXP4Q8IVH2 680 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 CCNYL1Q8N7R7 359 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 ASCC1Q8N9N2 400 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 ZNF420Q8TAQ5 688 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 FAM172AQ8WUF8 416 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 CPLX3Q8WVH0 158 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 HPS1Q92902 700 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 TSNARE1Q96NA8 513 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 DOK1Q99704 481 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 WACQ9BTA9 647 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 PAIP1Q9H074 479 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 SLITRK6Q9H5Y7 841 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 PCDH10Q9P2E7 1040 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 GGT7Q9UJ14 662 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 MAST3O60307 1309 aa11.25□□□□□ -0.61
PDLIM5-210ENST00000508216 ZSCAN5CA6NGD5 496 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 TRPC5OSA6NMA1 111 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 H3BUI4 141 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 MSI1O43347 362 aaKnown RBP11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 USP1O94782 785 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 POP4O95707 220 aaKnown RBP11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 CD4P01730 458 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 CAPN1P07384 714 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 KRT7P08729 469 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 HNRNPH3P31942 346 aaKnown RBP11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 SHMT1P34896 483 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 TALDO1P37837 337 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 MTHFSP49914 203 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 ACTR3P61158 418 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 PHC1P78364 1004 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 PTK2Q05397 1052 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 IFIT5Q13325 482 aaKnown RBP11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 SELPLGQ14242 412 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 MMEL1Q495T6 779 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 SLC9C2Q5TAH2 1124 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 SCARA3Q6AZY7 606 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 TMC5Q6UXY8 1006 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 RAPH1Q70E73 1250 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 CCDC116Q8IYX3 515 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 FLCNQ8NFG4 579 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 TBC1D15Q8TC07 691 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 SLC7A3Q8WY07 619 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 PMEPA1Q969W9 287 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 COG8Q96MW5 612 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 MNTQ99583 582 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 DSCC1Q9BVC3 393 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 TMEM168Q9H0V1 697 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 AVENQ9NQS1 362 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 PI4KBQ9UBF8 816 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 PFDN2Q9UHV9 154 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 WBP11Q9Y2W2 641 aaKnown RBP11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 PPP2R3BQ9Y5P8 575 aa11.24□□□□□ -0.61
PDLIM5-210ENST00000508216 C2CD2LO14523 706 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 MICAL2O94851 1124 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 CDK14O94921 469 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 PCSK2P16519 638 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 ALAS2P22557 587 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 IDUAP35475 653 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 CASP5P51878 434 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 SLC5A3P53794 718 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 CD300CQ08708 224 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 SNAPC2Q13487 334 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 ZNF124Q15973 351 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 TBRG1Q3YBR2 411 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 FIGNQ5HY92 759 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 C6orf163Q5TEZ5 329 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 NFRKBQ6P4R8 1299 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 NLRP10Q86W26 655 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 CDR2LQ86X02 465 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 CHPFQ8IZ52 775 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 REXO1Q8N1G1 1221 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms