RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ATICP31939 592 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 ICA1Q05084 483 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 FHL3Q13643 280 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 ELF2Q15723 593 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 PFKFB4Q16877 469 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 NRN1LQ496H8 165 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 ARHGAP15Q53QZ3 475 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 TMTC4Q5T4D3 741 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 MANEALQ5VSG8 457 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 FNDC7Q5VTL7 733 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 TLDC1Q6P9B6 456 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 CCDC28AQ8IWP9 274 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 CACNA2D3Q8IZS8 1091 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 TMEM171Q8WVE6 324 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 ASB10Q8WXI3 467 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 LPIN2Q92539 896 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 ZNF503Q96F45 646 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 SNX27Q96L92 541 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 CDK5RAP1Q96SZ6 601 aaKnown RBP4.12□□□□□ -1.75
LSM6-205ENST00000507449 EIF2AQ9BY44 585 aaKnown RBP4.12□□□□□ -1.75
LSM6-205ENST00000507449 TRIM5Q9C035 493 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.12□□□□□ -1.75
LSM6-205ENST00000507449 PCDHAC1Q9H158 963 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 GBA2Q9HCG7 927 aaPredicted RBP4.12□□□□□ -1.75
LSM6-205ENST00000507449 OBP2BQ9NPH6 170 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 NECTIN3Q9NQS3 549 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 TM7SF3Q9NS93 570 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 INTS13Q9NVM9 706 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 ZSCAN32Q9NX65 697 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 GRHPRQ9UBQ7 328 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 VPS51Q9UID3 782 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 MAGED2Q9UNF1 606 aaPredicted RBP4.12□□□□□ -1.75
LSM6-205ENST00000507449 FZD1Q9UP38 647 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 PCDHGB3Q9Y5G1 929 aa4.12□□□□□ -1.75
LSM6-205ENST00000507449 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.12□□□□□ -1.75
LSM6-205ENST00000507449 MORC2Q9Y6X9 1032 aaPredicted RBP4.12□□□□□ -1.75
LSM6-205ENST00000507449 TRGV11A0A075B6L2 103 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 ZAR1LA6NP61 321 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 HNRNPDLO14979 420 aaKnown RBP4.11□□□□□ -1.75
LSM6-205ENST00000507449 PIP5K1BO14986 540 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 PPM1DO15297 605 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 CD3EAPO15446 510 aaKnown RBP4.11□□□□□ -1.75
LSM6-205ENST00000507449 TRIAP1O43715 76 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 INMTO95050 263 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 RASAL1O95294 804 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 TNFRSF6BO95407 300 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 CSTBP04080 98 aaKnown RBP4.11□□□□□ -1.75
LSM6-205ENST00000507449 ARP10275 920 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 HGFP14210 728 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 PECAM1P16284 738 aaPredicted RBP4.11□□□□□ -1.75
LSM6-205ENST00000507449 MST1P26927 711 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 BLMHQ13867 455 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 SPARCL1Q14515 664 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 SF3B3Q15393 1217 aaKnown RBP4.11□□□□□ -1.75
LSM6-205ENST00000507449 ZACNQ401N2 412 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 SPDYE7PQ495Y7 208 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 CCDC38Q502W7 563 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 C4orf46Q504U0 113 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 LIN54Q6MZP7 749 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 ARMC6Q6NXE6 501 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 PGBD2Q6P3X8 592 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 FBXO38Q6PIJ6 1188 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 SLC15A3Q8IY34 581 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 MYCT1Q8N699 235 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 ANKRD42Q8N9B4 389 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 SSH3Q8TE77 659 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 STYXQ8WUJ0 223 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 ATG4AQ8WYN0 398 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 LENG9Q96B70 501 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 FAM136AQ96C01 138 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 FAM227BQ96M60 508 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 PLEKHG4BQ96PX9 1271 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 RMDN3Q96TC7 470 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 HERPUD2Q9BSE4 406 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 MLST8Q9BVC4 326 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 FAM83DQ9H4H8 585 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 ANKFY1Q9P2R3 1169 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 ZMYND8Q9ULU4 1186 aaPredicted RBP4.11□□□□□ -1.75
LSM6-205ENST00000507449 SCAF8Q9UPN6 1271 aaKnown RBP4.11□□□□□ -1.75
LSM6-205ENST00000507449 HPSEQ9Y251 543 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 SNX14Q9Y5W7 946 aa4.11□□□□□ -1.75
LSM6-205ENST00000507449 AQP7P3A6NL99 342 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 VWC2LB2RUY7 222 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 ACKR2O00590 384 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 TRIM38O00635 465 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 CREB3O43889 395 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 SKAP2O75563 359 aaPredicted RBP4.1□□□□□ -1.75
LSM6-205ENST00000507449 VNN1O95497 513 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 HLA-DOAP06340 250 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 RHOP08100 348 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 SRGNP10124 158 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 EGR2P11161 476 aaPredicted RBP4.1□□□□□ -1.75
LSM6-205ENST00000507449 NTSR1P30989 418 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 GRK6P43250 576 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 PRKAG1P54619 331 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 GUCY1B3Q02153 619 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 E2F2Q14209 437 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 PTK2BQ14289 1009 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 MAPKAPK3Q16644 382 aa4.1□□□□□ -1.75
LSM6-205ENST00000507449 LY6KQ17RY6 165 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms