RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 ATRXP46100 2492 aa6.2□□□□□ -1.42
GYPB-208ENST00000507009 ZZEF1O43149 2961 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 SPEGQ15772 3267 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 A0A0B4J269 797 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 ANO9A1A5B4 782 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 KPNA7A9QM74 516 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 H0YCG3 227 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 PIRO00625 290 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 ST8SIA5O15466 376 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 HCRTO43612 131 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 TADA3O75528 432 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 ALDH1A2O94788 518 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 CD2BP2O95400 341 aaKnown RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 ZIC2O95409 532 aaPredicted RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 NFATC1O95644 943 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 KRT19P08727 400 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 HDCP19113 662 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 CSRP1P21291 193 aaKnown RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 WEE1P30291 646 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 POLR2BP30876 1174 aaKnown RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 WASP42768 502 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 PTGER3P43115 390 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 TRAPPC10P48553 1259 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 TOB1P50616 345 aaPredicted RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 SLC12A3P55017 1021 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 ANAPC15P60006 121 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 RPL10AP62906 217 aaKnown RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 TFAMQ00059 246 aaKnown RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 FAM160A1Q05DH4 1040 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 IFRD2Q12894 506 aaPredicted RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 LMAN2Q12907 356 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 USP4Q13107 963 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 ZNF77Q15935 545 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 EML3Q32P44 896 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 ARSHQ5FYA8 562 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 EMC10Q5UCC4 262 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 SLC39A4Q6P5W5 647 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 SPATA2LQ8IUW3 424 aaPredicted RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 SFTPA1Q8IWL2 248 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 CD302Q8IX05 232 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 HDDC3Q8N4P3 179 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 CHCHD4Q8N4Q1 142 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 ALLCQ8N6M5 410 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 TXNDC5Q8NBS9 432 aaKnown RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 FBXO18Q8NFZ0 1043 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 USP33Q8TEY7 942 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 C2orf15Q8WU43 125 aaKnown RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 FAM84AQ96KN4 292 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 SPACA7Q96KW9 195 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 REEP2Q9BRK0 252 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 TMEM74BQ9NUR3 256 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 SMPD4Q9NXE4 827 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 DDX43Q9NXZ2 648 aaKnown RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 HSFX1Q9UBD0 423 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 UXTQ9UBK9 157 aaPredicted RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 EBF1Q9UH73 591 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 MBD1Q9UIS9 605 aaPredicted RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 KCNG1Q9UIX4 513 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 CPSF3Q9UKF6 684 aaKnown RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 GTF3C4Q9UKN8 822 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 AGO2Q9UKV8 859 aaKnown RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 MMP17Q9ULZ9 603 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 LIMCH1Q9UPQ0 1083 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 AGAP1Q9UPQ3 857 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 WASF3Q9UPY6 502 aa6.19□□□□□ -1.42
GYPB-208ENST00000507009 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 HELZP42694 1942 aaKnown RBP6.19□□□□□ -1.42
GYPB-208ENST00000507009 ZFYVE26Q68DK2 2539 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 TCRBV21S2A2A0A5A6 115 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 MYMKA6NI61 221 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 SOBPA7XYQ1 873 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 K7EQS6 105 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 SGK1O00141 431 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 TRAK2O60296 914 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 FAM189A1O60320 539 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 HUS1O60921 280 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 TBCAO75347 108 aaKnown RBP6.18□□□□□ -1.42
GYPB-208ENST00000507009 ITGB3P05106 788 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 HNRNPLP14866 589 aaKnown RBP eCLIP6.18□□□□□ -1.421e-6■■■□□ 17.3
GYPB-208ENST00000507009 PLCG1P19174 1290 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 ITPKAP23677 461 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 RDXP35241 583 aaKnown RBP6.18□□□□□ -1.42
GYPB-208ENST00000507009 OPRD1P41143 372 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 SLC6A11P48066 632 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 PSMC1P62191 440 aaKnown RBP6.18□□□□□ -1.42
GYPB-208ENST00000507009 FAM193AP78312 1265 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 ATP2C1P98194 919 aaPredicted RBP6.18□□□□□ -1.42
GYPB-208ENST00000507009 MYL7Q01449 175 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 CYP27A1Q02318 531 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 SMARCB1Q12824 385 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 MCM6Q14566 821 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 ZNF268Q14587 947 aaPredicted RBP6.18□□□□□ -1.42
GYPB-208ENST00000507009 CRY1Q16526 586 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 MSS51Q4VC12 460 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 LYSMD4Q5XG99 296 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 FILIP1Q7Z7B0 1213 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 C11orf74Q86VG3 221 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 PDCL2Q8N4E4 241 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 PNPLA1Q8N8W4 532 aa6.18□□□□□ -1.42
GYPB-208ENST00000507009 FSIP1Q8NA03 581 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms