RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 EPC1Q9H2F5 836 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 KIF9Q9HAQ2 790 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 GDPD2Q9HCC8 539 aa15.35■□□□□ 0.05
CDC42SE2-209ENST00000506419 TRAV19A0A0A6YYK7 116 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 A0A1W2PQ27 194 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 A0A1W2PQ64 194 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 A0A1W2PQD8 194 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 ZNF840PA6NDX5 716 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 CHURC1-FNTBB4DL54 471 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 TRDMT1O14717 391 aaKnown RBP15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 HRO43593 1189 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 RHOBTB3O94955 611 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 MYL1P05976 194 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 USP17L7P0C7H9 530 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 RAP1GAPP47736 663 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 FNTBP49356 437 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 AP3M2P53677 418 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 BIRC3Q13489 604 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 MTF1Q14872 753 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 TMEM196Q5HYL7 178 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 SV2AQ7L0J3 742 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 FSIP1Q8NA03 581 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 B3GALNT2Q8NCR0 500 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 SH3RF2Q8TEC5 729 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 CEP295NLQ96MC4 621 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 POLR3BQ9NW08 1133 aaPredicted RBP15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 MAPK8IP1Q9UQF2 711 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 TRAF3IP3Q9Y228 551 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 WNT6Q9Y6F9 365 aa15.34■□□□□ 0.05
CDC42SE2-209ENST00000506419 FANCMQ8IYD8 2048 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 PAPSS2O95340 614 aaPredicted RBP15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 CKMP06732 381 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 TGM1P22735 817 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 GJA4P35212 333 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 ID4P47928 161 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 NRLP54845 237 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 NOP14P78316 857 aaKnown RBP15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 TAF10Q12962 218 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 PDGFRLQ15198 375 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 EML3Q32P44 896 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 ZACNQ401N2 412 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 CC2D1AQ6P1N0 951 aaPredicted RBP15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 KRBA2Q6ZNG9 492 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 SYNPOQ8N3V7 929 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 TTC16Q8NEE8 873 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 TMC2Q8TDI7 906 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 OSCP1Q8WVF1 389 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 KCNK16Q96T55 309 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 ECT2Q9H8V3 914 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 DUS2Q9NX74 493 aaKnown RBP15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 TRPM5Q9NZQ8 1165 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 ARHGAP26Q9UNA1 814 aa15.33■□□□□ 0.04
CDC42SE2-209ENST00000506419 PATJQ8NI35 1801 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 TRIM66O15016 1216 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 AKAP3O75969 853 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 ZNF202O95125 648 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 EGFP01133 1207 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 TCF3P15923 654 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 ANXA13P27216 316 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 USP4Q13107 963 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 SRSF5Q13243 272 aaKnown RBP15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 SGSM1Q2NKQ1 1148 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 ZNF699Q32M78 642 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 ZNF667Q5HYK9 610 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 CEP135Q66GS9 1140 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 SPOPLQ6IQ16 392 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 SCARA5Q6ZMJ2 495 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 EZH1Q92800 747 aaPredicted RBP15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 RMDN1Q96DB5 314 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 HINFPQ9BQA5 517 aa15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 SCAND2PQ9GZW5 306 aaPredicted RBP15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 CHORDC1Q9UHD1 332 aaPredicted RBP15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 SMG5Q9UPR3 1016 aaKnown RBP15.32■□□□□ 0.04
CDC42SE2-209ENST00000506419 LEFTY2O00292 366 aa15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 TNFRSF10BO14763 440 aa15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 IKBKBO14920 756 aa15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 CALUO43852 315 aaPredicted RBP15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 GRSF1Q12849 480 aaKnown RBP eCLIP15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 ORC1Q13415 861 aa15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 LPAL2Q16609 132 aa15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 NFIL3Q16649 462 aa15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 HEATR6Q6AI08 1181 aaKnown RBP15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 ACOT1Q86TX2 421 aa15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 NUP93Q8N1F7 819 aa15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 CRYBG2Q8N1P7 616 aa15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 SCAMP5Q8TAC9 235 aa15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 ELOVL4Q9GZR5 314 aa15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 APOBEC3GQ9HC16 384 aaKnown RBP15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.31■□□□□ 0.044e-8■■■■■ 61.6
CDC42SE2-209ENST00000506419 IL37Q9NZH6 218 aa15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 NUP210Q8TEM1 1887 aaPredicted RBP15.31■□□□□ 0.04
CDC42SE2-209ENST00000506419 ANTXRLA6NF34 631 aa15.3■□□□□ 0.04
CDC42SE2-209ENST00000506419 BEST1O76090 585 aa15.3■□□□□ 0.04
CDC42SE2-209ENST00000506419 OLFM2O95897 454 aa15.3■□□□□ 0.04
CDC42SE2-209ENST00000506419 ABL1P00519 1130 aa15.3■□□□□ 0.04
CDC42SE2-209ENST00000506419 ASS1P00966 412 aaKnown RBP15.3■□□□□ 0.04
CDC42SE2-209ENST00000506419 HLA-DRAP01903 254 aa15.3■□□□□ 0.04
CDC42SE2-209ENST00000506419 HOXA6P31267 233 aa15.3■□□□□ 0.04
CDC42SE2-209ENST00000506419 IFNAR2P48551 515 aa15.3■□□□□ 0.04
CDC42SE2-209ENST00000506419 PGFP49763 221 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms