RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 ATF2P15336 505 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 NPR3P17342 541 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 MMP8P22894 467 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 BDNFP23560 247 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 ADORA2BP29275 332 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 ACADSBP45954 432 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 TCEAL1Q15170 157 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 RAB41Q5JT25 222 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 CCDC122Q5T0U0 273 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 PMF1Q6P1K2 205 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 LILRA6Q6PI73 481 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 RNF19BQ6ZMZ0 732 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 TOGARAM2Q6ZUX3 1019 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 MON1BQ7L1V2 547 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 RTL10Q7L3V2 364 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 TMC7Q7Z402 723 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 TMEM110Q86TL2 294 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 SPATA2LQ8IUW3 424 aaPredicted RBP7.61□□□□□ -1.19
NUP54-204ENST00000506098 MCOLN2Q8IZK6 566 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 SCML4Q8N228 414 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 ZMIZ2Q8NF64 920 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 UBA3Q8TBC4 463 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 KCTD13Q8WZ19 329 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 TIFAQ96CG3 184 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 HSFY1Q96LI6 401 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 KLHL5Q96PQ7 755 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 SMOQ99835 787 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 TCF25Q9BQ70 676 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 MED10Q9BTT4 135 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 SLC4A5Q9BY07 1137 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 TSPYL1Q9H0U9 437 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 LUC7LQ9NQ29 371 aaKnown RBP7.61□□□□□ -1.19
NUP54-204ENST00000506098 TMEM30AQ9NV96 361 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 TAS2R14Q9NYV8 317 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.61□□□□□ -1.19
NUP54-204ENST00000506098 ZKSCAN5Q9Y2L8 839 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 PCDHA13Q9Y5I0 950 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 CDH23Q9H251 3354 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 REV3LO60673 3130 aa7.61□□□□□ -1.19
NUP54-204ENST00000506098 A0A0A6YYK5 440 aaPredicted RBP7.6□□□□□ -1.19
NUP54-204ENST00000506098 TCRBV5S1A1TA0A578 114 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 TTC36A6NLP5 189 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 BTNL10A8MVZ5 291 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 TULP2O00295 520 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 TNFRSF10BO14763 440 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 TRIM66O15016 1216 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 TEX28O15482 410 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 AP1G2O75843 785 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 GABBR2O75899 941 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 IPO7O95373 1038 aaKnown RBP7.6□□□□□ -1.19
NUP54-204ENST00000506098 CALB1P05937 261 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 ADH1AP07327 375 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 H2AFZP0C0S5 128 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 CCDC175P0C221 793 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 TMEM253P0C7T8 217 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 MYBL1P10243 752 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 HAPLN1P10915 354 aaPredicted RBP7.6□□□□□ -1.19
NUP54-204ENST00000506098 RPL17P18621 184 aaKnown RBP7.6□□□□□ -1.19
NUP54-204ENST00000506098 CYP2F1P24903 491 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 SSTR3P32745 418 aaPredicted RBP7.6□□□□□ -1.19
NUP54-204ENST00000506098 MAGEA1P43355 309 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 NSFP46459 744 aaKnown RBP7.6□□□□□ -1.19
NUP54-204ENST00000506098 VAV2P52735 878 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 CACNA2D1P54289 1103 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 GALCP54803 685 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 SLC8A3P57103 927 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 SNX16P57768 344 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 CYP27A1Q02318 531 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 PDCLQ13371 301 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 ZNF268Q14587 947 aaPredicted RBP7.6□□□□□ -1.19
NUP54-204ENST00000506098 SPA17Q15506 151 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 PTPN20Q4JDL3 420 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 NAA35Q5VZE5 725 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 H2AFVQ71UI9 128 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 ERICH1Q86X53 443 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 PASD1Q8IV76 773 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 TCEAL8Q8IYN2 117 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 TXLNBQ8N3L3 684 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 GPATCH11Q8N954 259 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 C1orf131Q8NDD1 294 aaKnown RBP7.6□□□□□ -1.19
NUP54-204ENST00000506098 ACRBPQ8NEB7 543 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 KIAA1524Q8TCG1 905 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 HDAC7Q8WUI4 952 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 CPA5Q8WXQ8 436 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 AUTS2Q8WXX7 1259 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 TRIM11Q96F44 468 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 PPP1R13BQ96KQ4 1090 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 SPATA17Q96L03 361 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 C8orf48Q96LL4 319 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 NOX5Q96PH1 765 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 CPXM1Q96SM3 734 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 EMILIN2Q9BXX0 1053 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 MIS12Q9H081 205 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 CRISPLD1Q9H336 500 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 DMAP1Q9NPF5 467 aaPredicted RBP7.6□□□□□ -1.19
NUP54-204ENST00000506098 AVENQ9NQS1 362 aaPredicted RBP7.6□□□□□ -1.19
NUP54-204ENST00000506098 ENTPD7Q9NQZ7 604 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 KRT82Q9NSB4 513 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 SEPT11Q9NVA2 429 aaKnown RBP7.6□□□□□ -1.19
NUP54-204ENST00000506098 COMMD8Q9NX08 183 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms