RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 HCRTO43612 131 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 KRT13P13646 458 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 PTPN1P18031 435 aaKnown RBP11.1□□□□□ -0.63
NR1I3-222ENST00000506018 SOX9P48436 509 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 IFNAR2P48551 515 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 NDUFA8P51970 172 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 GRSF1Q12849 480 aaKnown RBP eCLIP11.1□□□□□ -0.63
NR1I3-222ENST00000506018 NR1H3Q13133 447 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 RUNX3Q13761 415 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 NCOA4Q13772 614 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 MTF1Q14872 753 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 SGSM1Q2NKQ1 1148 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 TDRD10Q5VZ19 366 aaKnown RBP11.1□□□□□ -0.63
NR1I3-222ENST00000506018 GPR161Q8N6U8 529 aaKnown RBP11.1□□□□□ -0.63
NR1I3-222ENST00000506018 ZBTB44Q8NCP5 570 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 CCDC150Q8NCX0 1101 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 STKLD1Q8NE28 680 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 TTC8Q8TAM2 541 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 TMC2Q8TDI7 906 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 PARD3BQ8TEW8 1205 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 TAF4BQ92750 862 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 C8orf48Q96LL4 319 aa11.1□□□□□ -0.63
NR1I3-222ENST00000506018 ATG2BQ96BY7 2078 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 RALGAPA1Q6GYQ0 2036 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 EP300Q09472 2414 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-222ENST00000506018 FAM237AA0A1B0GTK4 181 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 SHISA7A6NL88 538 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 LRRIQ3A6PVS8 624 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-222ENST00000506018 ATG13O75143 517 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 RHOBTB3O94955 611 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 RTN3O95197 1032 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-222ENST00000506018 HDCP19113 662 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 CASP4P49662 377 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 NOP14P78316 857 aaKnown RBP11.09□□□□□ -0.63
NR1I3-222ENST00000506018 CLDN10P78369 228 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 TNK2Q07912 1038 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 PON2Q15165 354 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 SKOR2Q2VWA4 1001 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-222ENST00000506018 SCARA3Q6AZY7 606 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 KRBA2Q6ZNG9 492 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 INTS8Q75QN2 995 aaKnown RBP11.09□□□□□ -0.63
NR1I3-222ENST00000506018 ZNF687Q8N1G0 1237 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 EFCAB3Q8N7B9 438 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 B3GALNT2Q8NCR0 500 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 TTC16Q8NEE8 873 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 PDZD8Q8NEN9 1154 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 CCDC26Q8TAB7 109 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 ZNF516Q92618 1163 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 ATP2A3Q93084 1043 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 LRRC3BQ96PB8 259 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 FAM83CQ9BQN1 747 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 MED10Q9BTT4 135 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 KCTD10Q9H3F6 313 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 EBF3Q9H4W6 596 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 DMAC2Q9NW81 257 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 RMND1Q9NWS8 449 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 DUS2Q9NX74 493 aaKnown RBP11.09□□□□□ -0.63
NR1I3-222ENST00000506018 HOOK1Q9UJC3 728 aaKnown RBP11.09□□□□□ -0.63
NR1I3-222ENST00000506018 TRAF3IP3Q9Y228 551 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 CCL26Q9Y258 94 aa11.09□□□□□ -0.63
NR1I3-222ENST00000506018 F8VP50 259 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 TADA3O75528 432 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 ZNF202O95125 648 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 ABL1P00519 1130 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 C4BPAP04003 597 aaKnown RBP11.08□□□□□ -0.64
NR1I3-222ENST00000506018 NR2F2P24468 414 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 CNR2P34972 360 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 PIK3CAP42336 1068 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 VAMP7P51809 220 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 UBE2HP62256 183 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 DPYDQ12882 1025 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 NFIL3Q16649 462 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 TSSK4Q6SA08 328 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 DDX42Q86XP3 938 aaKnown RBP eCLIP11.08□□□□□ -0.64
NR1I3-222ENST00000506018 NUP93Q8N1F7 819 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 GUF1Q8N442 669 aaKnown RBP11.08□□□□□ -0.64
NR1I3-222ENST00000506018 ARL14EPQ8N8R7 260 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-222ENST00000506018 OSCP1Q8WVF1 389 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 NELL1Q92832 810 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 SMARCD1Q96GM5 515 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 TTLL2Q9BWV7 592 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 XYLT2Q9H1B5 865 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 EPC1Q9H2F5 836 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 GMEB2Q9UKD1 530 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 ARHGAP26Q9UNA1 814 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 CFAP54Q96N23 3096 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 GVINP1Q7Z2Y8 2422 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 DMDP11532 3685 aa11.08□□□□□ -0.64
NR1I3-222ENST00000506018 MYO16Q9Y6X6 1858 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 TRDMT1O14717 391 aaKnown RBP11.07□□□□□ -0.64
NR1I3-222ENST00000506018 SLC9A3R1O14745 358 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-222ENST00000506018 LILRB5O75023 590 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 PAPSS2O95340 614 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-222ENST00000506018 NFATC1O95644 943 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 MBD3O95983 291 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 TCF3P15923 654 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 DRD1P21728 446 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 YWHAQP27348 245 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 PSMC2P35998 433 aaKnown RBP11.07□□□□□ -0.64
NR1I3-222ENST00000506018 ENPEPQ07075 957 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms