RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 USP4Q13107 963 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 TDRD10Q5VZ19 366 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 CCDC26Q8TAB7 109 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 SH3RF2Q8TEC5 729 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 ZNF516Q92618 1163 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 TTLL2Q9BWV7 592 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 ELOVL4Q9GZR5 314 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 EXOC1Q9NV70 894 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 C2orf42Q9NWW7 574 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 NXF1Q9UBU9 619 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 SERTAD1Q9UHV2 236 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 CDV3Q9UKY7 258 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 ARHGAP26Q9UNA1 814 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 WNT6Q9Y6F9 365 aa12.86□□□□□ -0.35
PDLIM7-214ENST00000505746 FANCMQ8IYD8 2048 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 F8VP50 259 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 RNF40O75150 1001 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 CLSTN1O94985 981 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 EGFP01133 1207 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 SRSF5Q13243 272 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 BIRC3Q13489 604 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 EML3Q32P44 896 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 CAMKK1Q8N5S9 505 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 KIAA1958Q8N8K9 716 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 CD101Q93033 1021 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 CHFRQ96EP1 664 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 SLITRK1Q96PX8 696 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 RTKNQ9BST9 563 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 XYLT2Q9H1B5 865 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 VRTNQ9H8Y1 702 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 FBRSL1Q9HCM7 1045 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 PARD6AQ9NPB6 346 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 USP25Q9UHP3 1055 aa12.85□□□□□ -0.35
PDLIM7-214ENST00000505746 ZNF840PA6NDX5 716 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 ACTN4O43707 911 aaKnown RBP12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 NFATC1O95644 943 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 ABL1P00519 1130 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 MYL1P05976 194 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 ATXN1P54253 815 aaKnown RBP12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 USP46P62068 366 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 CLDN10P78369 228 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 STK4Q13043 487 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 PKP1Q13835 747 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 CSRP2Q16527 193 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 ZNF667Q5HYK9 610 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 PKN3Q6P5Z2 889 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 SLC9A9Q8IVB4 645 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 GRAMD1CQ8IYS0 662 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 FAM160A2Q8N612 972 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 B3GALNT2Q8NCR0 500 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 PARD3BQ8TEW8 1205 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 TMEM174Q8WUU8 243 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 GAB3Q8WWW8 586 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 PAGE5Q96GU1 130 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 TNIP3Q96KP6 325 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 GZF1Q9H116 711 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 DPEP3Q9H4B8 488 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 SEMA4GQ9NTN9 838 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 NME7Q9Y5B8 376 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 NUP210Q8TEM1 1887 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 ATP8B3O60423 1300 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 F5P12259 2224 aa12.84□□□□□ -0.35
PDLIM7-214ENST00000505746 EP300Q09472 2414 aaPredicted RBP12.83□□□□□ -0.35
PDLIM7-214ENST00000505746 MED19A0JLT2 244 aaPredicted RBP12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 LRRIQ3A6PVS8 624 aaPredicted RBP12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 LEFTY2O00292 366 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 PDXKO00764 312 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 SLC9A3R1O14745 358 aaPredicted RBP12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 KLRC4O43908 158 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 RPP40O75818 363 aaKnown RBP12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 AKAP3O75969 853 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 RTN3O95197 1032 aaPredicted RBP12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 KIF20AO95235 890 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 P4HA1P13674 534 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 CMA1P23946 247 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 CASP4P49662 377 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 SLC7A9P82251 487 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 TAF10Q12962 218 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 NCOA4Q13772 614 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 ZNF699Q32M78 642 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 KMT5BQ4FZB7 885 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 SYT13Q7L8C5 426 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 CACNA2D4Q7Z3S7 1137 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 DDX42Q86XP3 938 aaKnown RBP eCLIP12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 NUP93Q8N1F7 819 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 PDZD8Q8NEN9 1154 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 PLEKHO2Q8TD55 490 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 NETO1Q8TDF5 533 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 ACDQ96AP0 544 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 LOXL4Q96JB6 756 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 B3GNT5Q9BYG0 378 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 ZNF518BQ9C0D4 1074 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 LINC00597Q9H2U6 94 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 DMAC2Q9NW81 257 aa12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.83□□□□□ -0.36
PDLIM7-214ENST00000505746 ZNF292O60281 2723 aa12.82□□□□□ -0.36
PDLIM7-214ENST00000505746 OTOGLQ3ZCN5 2332 aa12.82□□□□□ -0.36
PDLIM7-214ENST00000505746 A0A1B0GVL5 298 aa12.82□□□□□ -0.36
PDLIM7-214ENST00000505746 CLDN5O00501 218 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms