RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 KCTD6Q8NC69 237 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 C18orf25Q96B23 403 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 TTC25Q96NG3 672 aa18.13■□□□□ 0.49
TRAPPC11-204ENST00000505676 APOC4-APOC2K7ER74 178 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 DNALI1O14645 258 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 SEPT4O43236 478 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 PRPSAP2O60256 369 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 TCEA3O75764 348 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 ENDOD1O94919 500 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 APOC2P02655 101 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 RARBP10826 455 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 KRT10P13645 584 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 PDGFRAP16234 1089 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 GNL1P36915 607 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 SLC8A3P57103 927 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 PPP2R2AP63151 447 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 GNASQ5JWF2 1037 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 OLFML1Q6UWY5 402 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 FAM228AQ86W67 206 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 REM2Q8IYK8 340 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 DOCK3Q8IZD9 2030 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 SH2D3CQ8N5H7 860 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 OR2W6PQ8NHA6 318 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 CENPHQ9H3R5 247 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 SEMA4AQ9H3S1 761 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 TJP2Q9UDY2 1190 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 DNPEPQ9ULA0 475 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 SHOC2Q9UQ13 582 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 HES2Q9Y543 173 aa18.12■□□□□ 0.49
TRAPPC11-204ENST00000505676 TP73O15350 636 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 TTC4O95801 387 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 ABHD2P08910 425 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 AKAP5P24588 427 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 MDH1P40925 334 aaKnown RBP18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 ANKS1BQ7Z6G8 1248 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 SMG8Q8ND04 991 aaKnown RBP18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 RXFP2Q8WXD0 754 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 SERPINB12Q96P63 405 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 ZWILCHQ9H900 591 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 PPCSQ9HAB8 311 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 PRDM16Q9HAZ2 1276 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 KLHL11Q9NVR0 708 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 GPR182O15218 404 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 IL1R2P27930 398 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 SDC4P31431 198 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 PTPN9P43378 593 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 LLGL1Q15334 1064 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 GLRA4Q5JXX5 417 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 LRRC31Q6UY01 552 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 SLC26A9Q7LBE3 791 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 TTC30AQ86WT1 665 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 EMC1Q8N766 993 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 SPATA18Q8TC71 538 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 CCDC77Q9BR77 488 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 APOL6Q9BWW8 343 aa18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 CDC42EP4Q9H3Q1 356 aaKnown RBP18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 TPX2Q9ULW0 747 aaKnown RBP18.11■□□□□ 0.49
TRAPPC11-204ENST00000505676 SCN10AQ9Y5Y9 1956 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 PPEF2O14830 753 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 RGS16O15492 202 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 TOMM70O94826 608 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 RAB27AP51159 221 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 ZNF200P98182 395 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 TXNRD3NBQ6F5E7 133 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 TAOK1Q7L7X3 1001 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 SERINC5Q86VE9 423 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 KBTBD7Q8WVZ9 684 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 ZBTB9Q96C00 473 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 MAK16Q9BXY0 300 aaKnown RBP18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 AAASQ9NRG9 546 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 NOVA2Q9UNW9 492 aaKnown RBP18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 CDY2AQ9Y6F7 541 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 RASGRF2O14827 1237 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 MDM4O15151 490 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 CST8O60676 142 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 CST5P28325 142 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 PMF1Q6P1K2 205 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 CCDC25Q86WR0 208 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 ADGRF2Q8IZF7 708 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 TMEM86AQ8N2M4 240 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 C12orf29Q8N999 325 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 TRPV1Q8NER1 839 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 PPP1R10Q96QC0 940 aaKnown RBP18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 GIT1Q9Y2X7 761 aa18.1■□□□□ 0.49
TRAPPC11-204ENST00000505676 GRIN2DO15399 1336 aa18.09■□□□□ 0.49
TRAPPC11-204ENST00000505676 MCF2LO15068 1137 aa18.09■□□□□ 0.49
TRAPPC11-204ENST00000505676 STIP1P31948 543 aaKnown RBP18.09■□□□□ 0.49
TRAPPC11-204ENST00000505676 PSMC4P43686 418 aa18.09■□□□□ 0.49
TRAPPC11-204ENST00000505676 ARSEP51690 589 aa18.09■□□□□ 0.49
TRAPPC11-204ENST00000505676 P3H1Q32P28 736 aa18.09■□□□□ 0.49
TRAPPC11-204ENST00000505676 RIBC1Q8N443 379 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC11-204ENST00000505676 CENPTQ96BT3 561 aa18.09■□□□□ 0.49
TRAPPC11-204ENST00000505676 BCCIPQ9P287 314 aaKnown RBP eCLIP18.09■□□□□ 0.49
TRAPPC11-204ENST00000505676 PDE4CQ08493 712 aa18.08■□□□□ 0.49
TRAPPC11-204ENST00000505676 NBPF20Q3BBV1 942 aa18.08■□□□□ 0.49
TRAPPC11-204ENST00000505676 EFHC1Q5JVL4 640 aa18.08■□□□□ 0.49
TRAPPC11-204ENST00000505676 RFX6Q8HWS3 928 aa18.08■□□□□ 0.49
TRAPPC11-204ENST00000505676 ACTL9Q8TC94 416 aa18.08■□□□□ 0.49
TRAPPC11-204ENST00000505676 HNRNPABQ99729 332 aaKnown RBP18.08■□□□□ 0.49
TRAPPC11-204ENST00000505676 SENP6Q9GZR1 1112 aaPredicted RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms