RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ACKR2O00590 384 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 GNB5O14775 395 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 USO1O60763 962 aaKnown RBP7.62□□□□□ -1.19
VCAN-206ENST00000505615 CBFA2T3O75081 653 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 DKK1O94907 266 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 OAZ2O95190 189 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 CFIP05156 583 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 SERPINF2P08697 491 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 CYP4F3Q08477 520 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 MAPK6Q16659 721 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 DUOXA1Q1HG43 343 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 MAP7D1Q3KQU3 841 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 ADCK5Q3MIX3 580 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 C4orf17Q53FE4 359 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 NT5DC1Q5TFE4 455 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 LYSMD4Q5XG99 296 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 CENPPQ6IPU0 288 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 PCSK4Q6UW60 755 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 TOGARAM2Q6ZUX3 1019 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 LPCAT2Q7L5N7 544 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 DHX32Q7L7V1 743 aaKnown RBP7.62□□□□□ -1.19
VCAN-206ENST00000505615 TMPRSS7Q7RTY8 843 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 GLRX5Q86SX6 157 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 TMEM150AQ86TG1 271 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 MARCH9Q86YJ5 346 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 ZBTB8OSQ8IWT0 167 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 TPH2Q8IWU9 490 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 CMTM8Q8IZV2 173 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 TMEM130Q8N3G9 435 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 ATAD1Q8NBU5 361 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 APPL2Q8NEU8 664 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 USP13Q92995 863 aaPredicted RBP7.62□□□□□ -1.19
VCAN-206ENST00000505615 CD101Q93033 1021 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 C18orf25Q96B23 403 aaPredicted RBP7.62□□□□□ -1.19
VCAN-206ENST00000505615 TBC1D32Q96NH3 1257 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 LPIN3Q9BQK8 851 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 SLC26A6Q9BXS9 759 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 SLKQ9H2G2 1235 aaPredicted RBP7.62□□□□□ -1.19
VCAN-206ENST00000505615 PRORYQ9H606 182 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 RUBCNLQ9H714 662 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 MMP17Q9ULZ9 603 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 TCHHQ07283 1943 aa7.62□□□□□ -1.19
VCAN-206ENST00000505615 TLN1Q9Y490 2541 aaKnown RBP7.61□□□□□ -1.19
VCAN-206ENST00000505615 A0A087WWV3 80 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.61□□□□□ -1.19
VCAN-206ENST00000505615 K7EQS6 105 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 M0QZQ0 153 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 ARHGAP6O43182 974 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 FGF19O95750 216 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 EPXP11678 715 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 BMP4P12644 408 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 KCNE1P15382 129 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 IFNAR1P17181 557 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 ATF6P18850 670 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 ITPKBP27987 946 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 CDC25CP30307 473 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 RPL9P32969 192 aaKnown RBP7.61□□□□□ -1.19
VCAN-206ENST00000505615 MCM4P33991 863 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 DPP6P42658 865 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 ABCG1P45844 678 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 ALDH1A3P47895 512 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 ATXN3P54252 364 aaPredicted RBP7.61□□□□□ -1.19
VCAN-206ENST00000505615 NLRP5P59047 1200 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 AMPD2Q01433 879 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 GPR17Q13304 367 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 PDGFRLQ15198 375 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 CRY1Q16526 586 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 SPDYCQ5MJ68 293 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 MAEAQ7L5Y9 396 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 CD163Q86VB7 1156 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 NAXDQ8IW45 347 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 BLIDQ8IZY5 108 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 LSM14AQ8ND56 463 aaKnown RBP7.61□□□□□ -1.19
VCAN-206ENST00000505615 PIP4K2CQ8TBX8 421 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 ABHD17AQ96GS6 310 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 HSD17B14Q9BPX1 270 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 EIF2AK1Q9BQI3 630 aaKnown RBP7.61□□□□□ -1.19
VCAN-206ENST00000505615 KRTAP9-2Q9BYQ4 174 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 C2orf40Q9H1Z8 148 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 CDT1Q9H211 546 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 ECT2Q9H8V3 914 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 CNTN3Q9P232 1028 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 NAP1L2Q9ULW6 460 aaPredicted RBP7.61□□□□□ -1.19
VCAN-206ENST00000505615 NUB1Q9Y5A7 615 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 TMEM131Q92545 1883 aa7.61□□□□□ -1.19
VCAN-206ENST00000505615 UBR5O95071 2799 aaPredicted RBP7.61□□□□□ -1.19
VCAN-206ENST00000505615 MYH11P35749 1972 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 NUMA1Q14980 2115 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 NBASA2RRP1 2371 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 TRABD2BA6NFA1 517 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 OR6C75A6NL08 312 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 ABLIM1O14639 778 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 BNIP3LO60238 219 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 MARCH6O60337 910 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 LARGE1O95461 756 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 GCFC2P16383 781 aaKnown RBP7.6□□□□□ -1.19
VCAN-206ENST00000505615 LIG1P18858 919 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 MSX1P28360 303 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 OPRD1P41143 372 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 CHRNA4P43681 627 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms