RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 CDAN1Q8IWY9 1227 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 SRPK1Q96SB4 655 aaKnown RBP13.87□□□□□ -0.19
LETM1-203ENST00000505551 PLVAPQ9BX97 442 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 C1orf21Q9H246 121 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 SAYSD1Q9NPB0 183 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 HBS1LQ9Y450 684 aaKnown RBP13.87□□□□□ -0.19
LETM1-203ENST00000505551 FADS3Q9Y5Q0 445 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 IGKV6D-41A0A0C4DH26 115 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 MATN2O00339 956 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 ZBED1O96006 694 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 LDHAP00338 332 aaKnown RBP13.87□□□□□ -0.19
LETM1-203ENST00000505551 FDFT1P37268 417 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 ADCY7P51828 1080 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 RAB15P59190 212 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 CLPPQ16740 277 aaPredicted RBP13.87□□□□□ -0.19
LETM1-203ENST00000505551 EFHC1Q5JVL4 640 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 CHSY1Q86X52 802 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 AHI1Q8N157 1196 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 CCDC89Q8N998 374 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 GSTCDQ8NEC7 633 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 PLGRKTQ9HBL7 147 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 PI4KBQ9UBF8 816 aa13.87□□□□□ -0.19
LETM1-203ENST00000505551 CHORDC1Q9UHD1 332 aaPredicted RBP13.87□□□□□ -0.19
LETM1-203ENST00000505551 A0A088AWK7 358 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 EML1O00423 815 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 CDH2P19022 906 aaPredicted RBP13.86□□□□□ -0.19
LETM1-203ENST00000505551 FMO5P49326 533 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 NT5C2P49902 561 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 HIRAP54198 1017 aaPredicted RBP13.86□□□□□ -0.19
LETM1-203ENST00000505551 CREB5Q02930 508 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 LLGL1Q15334 1064 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 SYCP2LQ5T4T6 812 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 ERI1Q8IV48 349 aaKnown RBP13.86□□□□□ -0.19
LETM1-203ENST00000505551 TCP10LQ8TDR4 215 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 HAS1Q92839 578 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 HERPUD2Q9BSE4 406 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 INTS2Q9H0H0 1204 aaKnown RBP13.86□□□□□ -0.19
LETM1-203ENST00000505551 TUBA8Q9NY65 449 aaPredicted RBP13.86□□□□□ -0.19
LETM1-203ENST00000505551 APEX2Q9UBZ4 518 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 FAF1Q9UNN5 650 aaPredicted RBP13.86□□□□□ -0.19
LETM1-203ENST00000505551 KIAA1024Q9UPX6 916 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 CEPT1Q9Y6K0 416 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 AK5Q9Y6K8 562 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 COL11A2P13942 1736 aaPredicted RBP13.86□□□□□ -0.19
LETM1-203ENST00000505551 PIK3CDO00329 1044 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 GH2P01242 217 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 ADSSP30520 456 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 KRT81Q14533 505 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 COL19A1Q14993 1142 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 ZYXQ15942 572 aaKnown RBP13.86□□□□□ -0.19
LETM1-203ENST00000505551 ASPRV1Q53RT3 343 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 ICA1LQ8NDH6 482 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 ZNF564Q8TBZ8 553 aaPredicted RBP13.86□□□□□ -0.19
LETM1-203ENST00000505551 DDI1Q8WTU0 396 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 BTBD6Q96KE9 485 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 SNX27Q96L92 541 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 CEP295NLQ96MC4 621 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 BIRC8Q96P09 236 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 CSRNP1Q96S65 589 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 INO80BQ9C086 356 aaPredicted RBP13.86□□□□□ -0.19
LETM1-203ENST00000505551 CCDC68Q9H2F9 335 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 ZHX3Q9H4I2 956 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 PRELID1Q9Y255 219 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 SCN9AQ15858 1988 aa13.86□□□□□ -0.19
LETM1-203ENST00000505551 DHRS4L1P0CG22 281 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 DPEP1P16444 411 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 PMLP29590 882 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 CCR3P51677 355 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 SLC12A3P55017 1021 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 CENPCQ03188 943 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 SEPT7Q16181 437 aaKnown RBP13.85□□□□□ -0.19
LETM1-203ENST00000505551 EFHC2Q5JST6 749 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 SLFN13Q68D06 897 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 SIAH1Q8IUQ4 282 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 WDR75Q8IWA0 830 aaKnown RBP13.85□□□□□ -0.19
LETM1-203ENST00000505551 CCT7Q99832 543 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 SH3GL1Q99961 368 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 MRPL1Q9BYD6 325 aaKnown RBP13.85□□□□□ -0.19
LETM1-203ENST00000505551 RPAP3Q9H6T3 665 aaPredicted RBP13.85□□□□□ -0.19
LETM1-203ENST00000505551 COMMD8Q9NX08 183 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 SLC17A7Q9P2U7 560 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 LINC00854A0A1B0GVQ3 168 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 TTLL13PA6NNM8 815 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 FOXN3O00409 490 aaPredicted RBP13.85□□□□□ -0.19
LETM1-203ENST00000505551 FBP2O00757 339 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 P4HA2O15460 535 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 CCNT2O60583 730 aaKnown RBP13.85□□□□□ -0.19
LETM1-203ENST00000505551 DKC1O60832 514 aaKnown RBP eCLIP13.85□□□□□ -0.19
LETM1-203ENST00000505551 TNFAIP8O95379 198 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 KRT18P05783 430 aaKnown RBP13.85□□□□□ -0.19
LETM1-203ENST00000505551 CPOXP36551 454 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 NCKAP1LP55160 1127 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 NAA20P61599 178 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 CCNIQ14094 377 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 TRIP10Q15642 601 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 CLEC16AQ2KHT3 1053 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 BANPQ8N9N5 519 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 SHKBP1Q8TBC3 707 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 JADE3Q92613 823 aa13.85□□□□□ -0.19
LETM1-203ENST00000505551 ITPKCQ96DU7 683 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms