RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 PAPLNO95428 1278 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 VNN2O95498 520 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 CYP1A1P04798 512 aaPredicted RBP10.84□□□□□ -0.67
RFC1-210ENST00000505077 PTMAP06454 111 aaKnown RBP10.84□□□□□ -0.67
RFC1-210ENST00000505077 MMEP08473 750 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 HNRNPA1P09651 372 aaKnown RBP eCLIP10.84□□□□□ -0.67
RFC1-210ENST00000505077 CHRNB2P17787 502 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 TNFAIP3P21580 790 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 BDNFP23560 247 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 CYLC1P35663 651 aaPredicted RBP10.84□□□□□ -0.67
RFC1-210ENST00000505077 GRIK1P39086 918 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 GPD2P43304 727 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 ACADSBP45954 432 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 NSFP46459 744 aaKnown RBP10.84□□□□□ -0.67
RFC1-210ENST00000505077 ALDH1A3P47895 512 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 RPL34P49207 117 aaKnown RBP10.84□□□□□ -0.67
RFC1-210ENST00000505077 NOMO3P69849 1222 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 DUSP4Q13115 394 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 PDCLQ13371 301 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 GRIN2CQ14957 1233 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 VEPH1Q14D04 833 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 CCDC142Q17RM4 750 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 CLEC16AQ2KHT3 1053 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 C10orf76Q5T2E6 689 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 TMEM184AQ6ZMB5 413 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 ITIH5Q86UX2 942 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 PALB2Q86YC2 1186 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 GLYCTKQ8IVS8 523 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 LRRC8AQ8IWT6 810 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 TXLNBQ8N3L3 684 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 EFHBQ8N7U6 833 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 ATAD1Q8NBU5 361 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 KREMEN2Q8NCW0 462 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 IPO4Q8TEX9 1081 aaKnown RBP10.84□□□□□ -0.67
RFC1-210ENST00000505077 SLC22A17Q8WUG5 538 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 SLC35F5Q8WV83 523 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 KCTD13Q8WZ19 329 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 CASP10Q92851 521 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 SECISBP2LQ93073 1101 aaKnown RBP10.84□□□□□ -0.67
RFC1-210ENST00000505077 TRIM11Q96F44 468 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 LRCH3Q96II8 777 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 VCPIP1Q96JH7 1222 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 HSFY1Q96LI6 401 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 PGLYRP2Q96PD5 576 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 SEPT5Q99719 369 aaPredicted RBP10.84□□□□□ -0.67
RFC1-210ENST00000505077 RHOBTB2Q9BYZ6 727 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 NHEJ1Q9H9Q4 299 aaPredicted RBP10.84□□□□□ -0.67
RFC1-210ENST00000505077 CYP4F11Q9HBI6 524 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 COMMD8Q9NX08 183 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 ZDHHC7Q9NXF8 308 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 STRIP2Q9ULQ0 834 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 YIPF1Q9Y548 306 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 ASB3Q9Y575 518 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 PCDHGC5Q9Y5F6 944 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 HCFC2Q9Y5Z7 792 aa10.84□□□□□ -0.67
RFC1-210ENST00000505077 F8VP50 259 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 CLDN5O00501 218 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 SART1O43290 800 aaKnown RBP10.83□□□□□ -0.68
RFC1-210ENST00000505077 RTN3O95197 1032 aaPredicted RBP10.83□□□□□ -0.68
RFC1-210ENST00000505077 LCA5LO95447 670 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 LRG1P02750 347 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 C8AP07357 584 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 SKILP12757 684 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 UNGP13051 313 aaPredicted RBP10.83□□□□□ -0.68
RFC1-210ENST00000505077 CYP2F1P24903 491 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 EIF4A3P38919 411 aaKnown RBP10.83□□□□□ -0.68
RFC1-210ENST00000505077 NRIP1P48552 1158 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 KIF11P52732 1056 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 EPHB3P54753 998 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 PDE4CQ08493 712 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 GOLGA8FQ08AF8 430 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 GOLGA8DPQ0D2H9 430 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 KCNC3Q14003 757 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 ASTE1Q2TB18 679 aaPredicted RBP10.83□□□□□ -0.68
RFC1-210ENST00000505077 MGAT5BQ3V5L5 792 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 TAF3Q5VWG9 929 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 DENND1BQ6P3S1 775 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 ADGRD2Q7Z7M1 963 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 PIGZQ86VD9 579 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 PHF13Q86YI8 300 aaPredicted RBP10.83□□□□□ -0.68
RFC1-210ENST00000505077 ZDHHC17Q8IUH5 632 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 TMEM139Q8IV31 216 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 SCML4Q8N228 414 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 ELMOD1Q8N336 334 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 C1orf131Q8NDD1 294 aaKnown RBP10.83□□□□□ -0.68
RFC1-210ENST00000505077 CMASQ8NFW8 434 aaPredicted RBP10.83□□□□□ -0.68
RFC1-210ENST00000505077 SLC30A5Q8TAD4 765 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 OLIG1Q8TAK6 271 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 SLC7A14Q8TBB6 771 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 TRMT2BQ96GJ1 504 aaKnown RBP10.83□□□□□ -0.68
RFC1-210ENST00000505077 SMOQ99835 787 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 LPIN3Q9BQK8 851 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 FBXO44Q9H4M3 255 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 SFXN1Q9H9B4 322 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 MAN1C1Q9NR34 630 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 SEPT11Q9NVA2 429 aaKnown RBP10.83□□□□□ -0.68
RFC1-210ENST00000505077 MTCH2Q9Y6C9 303 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 NCANO14594 1321 aa10.83□□□□□ -0.68
RFC1-210ENST00000505077 A0A087X0T9 212 aa10.82□□□□□ -0.68
RFC1-210ENST00000505077 EIF3CLB5ME19 914 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms